Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.41□□□□□ -1.7
RPA3P35244 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.41□□□□□ -1.7
RPA3P35244 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.41□□□□□ -1.7
RPA3P35244 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.41□□□□□ -1.7
RPA3P35244 AP001781.1-201ENST00000530977 207 ntBASIC4.41□□□□□ -1.7
RPA3P35244 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.41□□□□□ -1.7
RPA3P35244 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.41□□□□□ -1.7
RPA3P35244 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.41□□□□□ -1.7
RPA3P35244 AL133243.1-201ENST00000614487 366 ntBASIC4.41□□□□□ -1.7
RPA3P35244 RNU6-368P-201ENST00000620928 107 ntBASIC4.41□□□□□ -1.7
RPA3P35244 RNU6-538P-201ENST00000622329 107 ntBASIC4.41□□□□□ -1.7
RPA3P35244 AC006840.1-201ENST00000623069 542 ntBASIC4.41□□□□□ -1.7
RPA3P35244 AC019278.1-201ENST00000623516 479 ntBASIC4.41□□□□□ -1.7
RPA3P35244 AP003072.5-201ENST00000623872 773 ntBASIC4.41□□□□□ -1.7
RPA3P35244 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.41□□□□□ -1.7
RPA3P35244 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RPA3P35244 OR2L1P-202ENST00000641567 1023 ntBASIC4.41□□□□□ -1.7
RPA3P35244 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RPA3P35244 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.41□□□□□ -1.7
RPA3P35244 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPA3P35244 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RPA3P35244 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
RPA3P35244 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.4□□□□□ -1.7
RPA3P35244 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RPA3P35244 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.4□□□□□ -1.7
RPA3P35244 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPA3P35244 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPA3P35244 RNA5SP388-201ENST00000362584 119 ntBASIC4.4□□□□□ -1.71
RPA3P35244 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPA3P35244 MIR192-201ENST00000384915 110 ntBASIC4.4□□□□□ -1.71
RPA3P35244 RNA5SP39-201ENST00000411245 120 ntBASIC4.4□□□□□ -1.71
RPA3P35244 RPS20P14-201ENST00000412545 360 ntBASIC4.4□□□□□ -1.71
RPA3P35244 MTND4LP21-201ENST00000415303 295 ntBASIC4.4□□□□□ -1.71
RPA3P35244 UQCRBP1-201ENST00000421129 336 ntBASIC4.4□□□□□ -1.71
RPA3P35244 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.4□□□□□ -1.71
RPA3P35244 NANOGP6-201ENST00000429190 847 ntBASIC4.4□□□□□ -1.71
RPA3P35244 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.4□□□□□ -1.71
RPA3P35244 BX119904.1-201ENST00000432026 348 ntBASIC4.4□□□□□ -1.71
RPA3P35244 UBE2V1P3-201ENST00000439651 417 ntBASIC4.4□□□□□ -1.71
RPA3P35244 YWHAZP2-201ENST00000440317 728 ntBASIC4.4□□□□□ -1.71
RPA3P35244 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.4□□□□□ -1.71
RPA3P35244 RPL23AP43-201ENST00000446445 471 ntBASIC4.4□□□□□ -1.71
RPA3P35244 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.4□□□□□ -1.71
RPA3P35244 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.4□□□□□ -1.71
RPA3P35244 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
RPA3P35244 SEPT14P1-201ENST00000458703 648 ntBASIC4.4□□□□□ -1.71
RPA3P35244 RPS29P22-201ENST00000472363 168 ntBASIC4.4□□□□□ -1.71
RPA3P35244 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.4□□□□□ -1.71
RPA3P35244 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RPA3P35244 RPS27AP18-201ENST00000515536 459 ntBASIC4.4□□□□□ -1.71
RPA3P35244 RN7SKP34-201ENST00000516142 244 ntBASIC4.4□□□□□ -1.71
RPA3P35244 AC018442.3-201ENST00000523025 183 ntBASIC4.4□□□□□ -1.71
RPA3P35244 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.4□□□□□ -1.71
RPA3P35244 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.4□□□□□ -1.71
RPA3P35244 AC137768.1-201ENST00000549998 553 ntBASIC4.4□□□□□ -1.71
RPA3P35244 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.4□□□□□ -1.71
RPA3P35244 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.4□□□□□ -1.71
RPA3P35244 AP005119.2-201ENST00000579735 1105 ntBASIC4.4□□□□□ -1.71
RPA3P35244 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.4□□□□□ -1.71
RPA3P35244 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.4□□□□□ -1.71
RPA3P35244 AC068790.7-201ENST00000602347 528 ntBASIC4.4□□□□□ -1.71
RPA3P35244 AL049536.1-201ENST00000625043 744 ntBASIC4.4□□□□□ -1.71
RPA3P35244 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.4□□□□□ -1.71
RPA3P35244 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
RPA3P35244 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPA3P35244 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RPA3P35244 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.4□□□□□ -1.71
RPA3P35244 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.4□□□□□ -1.71
RPA3P35244 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPA3P35244 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
RPA3P35244 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RPA3P35244 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPA3P35244 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPA3P35244 DHX40P1-201ENST00000588725 1412 ntBASIC4.39□□□□□ -1.71
RPA3P35244 CUL4AP1-201ENST00000514750 1863 ntBASIC4.39□□□□□ -1.71
RPA3P35244 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPA3P35244 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RPA3P35244 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RPA3P35244 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPA3P35244 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RPA3P35244 RNA5SP505-201ENST00000364748 108 ntBASIC4.39□□□□□ -1.71
RPA3P35244 RNU6-398P-201ENST00000384143 109 ntBASIC4.39□□□□□ -1.71
RPA3P35244 GLULP6-201ENST00000399502 913 ntBASIC4.39□□□□□ -1.71
RPA3P35244 RPS3AP23-201ENST00000401762 784 ntBASIC4.39□□□□□ -1.71
RPA3P35244 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.39□□□□□ -1.71
RPA3P35244 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.39□□□□□ -1.71
RPA3P35244 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.39□□□□□ -1.71
RPA3P35244 ELOCP8-201ENST00000439309 332 ntBASIC4.39□□□□□ -1.71
RPA3P35244 AL138878.2-201ENST00000440581 1241 ntBASIC4.39□□□□□ -1.71
RPA3P35244 ELOCP15-201ENST00000442090 332 ntBASIC4.39□□□□□ -1.71
RPA3P35244 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.39□□□□□ -1.71
RPA3P35244 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.39□□□□□ -1.71
RPA3P35244 RN7SL205P-201ENST00000490174 284 ntBASIC4.39□□□□□ -1.71
RPA3P35244 OR9N1P-201ENST00000491296 333 ntBASIC4.39□□□□□ -1.71
RPA3P35244 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.39□□□□□ -1.71
RPA3P35244 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.39□□□□□ -1.71
RPA3P35244 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.39□□□□□ -1.71
RPA3P35244 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.39□□□□□ -1.71
RPA3P35244 HNRNPKP5-201ENST00000515300 253 ntBASIC4.39□□□□□ -1.71
RPA3P35244 CDH12P4-201ENST00000517835 295 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms