Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.03□□□□□ -1.6
COL4A5P29400 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
COL4A5P29400 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.03□□□□□ -1.6
COL4A5P29400 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A5P29400 OR4A15-201ENST00000314706 1035 ntBASIC5.03□□□□□ -1.6
COL4A5P29400 MIR1911-201ENST00000410783 80 ntBASIC5.03□□□□□ -1.6
COL4A5P29400 OR4F13P-201ENST00000428478 931 ntBASIC5.03□□□□□ -1.6
COL4A5P29400 AC006011.1-201ENST00000442758 349 ntBASIC5.03□□□□□ -1.6
COL4A5P29400 RPS4XP4-201ENST00000443195 763 ntBASIC5.03□□□□□ -1.6
COL4A5P29400 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A5P29400 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.03□□□□□ -1.6
COL4A5P29400 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
COL4A5P29400 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.03□□□□□ -1.6
COL4A5P29400 KRT19P6-201ENST00000510983 209 ntBASIC5.03□□□□□ -1.6
COL4A5P29400 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.03□□□□□ -1.6
COL4A5P29400 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A5P29400 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.03□□□□□ -1.6
COL4A5P29400 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
COL4A5P29400 AL592436.1-201ENST00000605135 558 ntBASIC5.03□□□□□ -1.6
COL4A5P29400 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.03□□□□□ -1.6
COL4A5P29400 AC084757.4-201ENST00000616350 526 ntBASIC5.03□□□□□ -1.6
COL4A5P29400 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
COL4A5P29400 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A5P29400 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
COL4A5P29400 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.03□□□□□ -1.6
COL4A5P29400 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.03□□□□□ -1.6
COL4A5P29400 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.03□□□□□ -1.6
COL4A5P29400 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A5P29400 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A5P29400 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A5P29400 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.03□□□□□ -1.6
COL4A5P29400 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COL4A5P29400 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.02□□□□□ -1.61
COL4A5P29400 AL050321.1-201ENST00000432363 400 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.02□□□□□ -1.61
COL4A5P29400 RPL23AP46-201ENST00000438548 490 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 MRPL48P1-201ENST00000445390 636 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.02□□□□□ -1.61
COL4A5P29400 RPS29P19-201ENST00000479709 171 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 AC110792.1-201ENST00000491826 472 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.02□□□□□ -1.61
COL4A5P29400 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.02□□□□□ -1.61
COL4A5P29400 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
COL4A5P29400 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC5.02□□□□□ -1.61
COL4A5P29400 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.02□□□□□ -1.61
COL4A5P29400 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 TET1P1-201ENST00000426627 2301 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 MIR921-201ENST00000401133 56 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 RN7SKP156-201ENST00000410308 342 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.02□□□□□ -1.61
COL4A5P29400 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.02□□□□□ -1.61
COL4A5P29400 OR5BE1P-201ENST00000425977 939 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.02□□□□□ -1.61
COL4A5P29400 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.02□□□□□ -1.61
COL4A5P29400 HPRT1P2-201ENST00000505250 544 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 SOD1P3-201ENST00000518682 454 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.02□□□□□ -1.61
COL4A5P29400 AC110743.1-201ENST00000584870 478 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.02□□□□□ -1.61
COL4A5P29400 AC015967.1-201ENST00000619893 476 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 AC091905.2-201ENST00000623143 306 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 OR5BE1P-202ENST00000641168 1176 ntBASIC5.02□□□□□ -1.61
COL4A5P29400 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
COL4A5P29400 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A5P29400 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
COL4A5P29400 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A5P29400 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A5P29400 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A5P29400 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
COL4A5P29400 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A5P29400 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A5P29400 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.01□□□□□ -1.61
COL4A5P29400 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A5P29400 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A5P29400 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.01□□□□□ -1.61
COL4A5P29400 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.01□□□□□ -1.61
COL4A5P29400 SYF2P2-201ENST00000417620 583 ntBASIC5.01□□□□□ -1.61
COL4A5P29400 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.01□□□□□ -1.61
COL4A5P29400 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.01□□□□□ -1.61
COL4A5P29400 RPL23AP37-201ENST00000479658 549 ntBASIC5.01□□□□□ -1.61
COL4A5P29400 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.01□□□□□ -1.61
COL4A5P29400 YPEL5P3-201ENST00000547227 352 ntBASIC5.01□□□□□ -1.61
COL4A5P29400 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.01□□□□□ -1.61
COL4A5P29400 MIR4660-201ENST00000583549 74 ntBASIC5.01□□□□□ -1.61
COL4A5P29400 MIR5684-201ENST00000585074 65 ntBASIC5.01□□□□□ -1.61
COL4A5P29400 AC114878.2-201ENST00000604863 1251 ntBASIC5.01□□□□□ -1.61
COL4A5P29400 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms