Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC124944.2-201ENST00000429866 1242 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.89□□□□□ -1.63
ABCD3P28288 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ABCD3P28288 ELOCP11-201ENST00000436690 332 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 ELOCP16-201ENST00000444494 332 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 MTCYBP42-201ENST00000444653 1130 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 RPL7L1P1-201ENST00000448259 785 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.89□□□□□ -1.63
ABCD3P28288 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.89□□□□□ -1.63
ABCD3P28288 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.89□□□□□ -1.63
ABCD3P28288 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.89□□□□□ -1.63
ABCD3P28288 ELOCP12-201ENST00000458706 328 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 NAP1L1P3-201ENST00000462291 880 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ABCD3P28288 RPS12P31-201ENST00000491419 398 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 RPS24P16-201ENST00000497294 392 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 RPL21P131-201ENST00000497298 483 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.89□□□□□ -1.63
ABCD3P28288 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.89□□□□□ -1.63
ABCD3P28288 AC093752.1-206ENST00000511823 336 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 AC022360.1-201ENST00000521058 340 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 AC092709.1-201ENST00000521355 1045 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.89□□□□□ -1.63
ABCD3P28288 AC090022.1-201ENST00000546569 311 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.89□□□□□ -1.63
ABCD3P28288 MTND1P8-201ENST00000571424 950 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 MIR1269B-201ENST00000580405 75 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.89□□□□□ -1.63
ABCD3P28288 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.89□□□□□ -1.63
ABCD3P28288 RPP40P2-201ENST00000603596 712 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 AC093765.1-201ENST00000603758 881 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 AC091488.1-201ENST00000604239 660 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.89□□□□□ -1.63
ABCD3P28288 AC243756.2-201ENST00000618406 463 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.89□□□□□ -1.63
ABCD3P28288 AL109659.3-201ENST00000624985 950 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ABCD3P28288 AC007529.1-201ENST00000418574 2178 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ABCD3P28288 ASNSP1-201ENST00000518311 1939 ntBASIC4.89□□□□□ -1.63
ABCD3P28288 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.89□□□□□ -1.63
ABCD3P28288 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ABCD3P28288 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
ABCD3P28288 PABPC1P6-201ENST00000445594 1829 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ABCD3P28288 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ABCD3P28288 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ABCD3P28288 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCD3P28288 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ABCD3P28288 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCD3P28288 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCD3P28288 AC011493.1-201ENST00000596753 1632 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ABCD3P28288 RN7SKP224-201ENST00000364140 325 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ABCD3P28288 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
ABCD3P28288 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCD3P28288 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
ABCD3P28288 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCD3P28288 TMSB4XP8-201ENST00000402089 135 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.88□□□□□ -1.63
ABCD3P28288 HNRNPDP2-201ENST00000406475 478 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 TMSB4XP6-201ENST00000415187 135 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.88□□□□□ -1.63
ABCD3P28288 AC027644.1-201ENST00000419595 298 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 AL355433.1-201ENST00000422804 300 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 TMSB4XP1-201ENST00000424567 135 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.88□□□□□ -1.63
ABCD3P28288 GTF2IP3-201ENST00000433887 494 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 OR52B5P-201ENST00000435337 951 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 RRM2P4-201ENST00000441721 562 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 AC016772.1-201ENST00000444170 1261 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 AL606517.1-201ENST00000446914 387 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 PTMAP3-201ENST00000447474 330 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 EXOSC3P1-201ENST00000448649 500 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.88□□□□□ -1.63
ABCD3P28288 AC233982.1-201ENST00000451247 436 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.88□□□□□ -1.63
ABCD3P28288 RN7SL172P-201ENST00000460535 303 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 AC022133.1-201ENST00000490961 571 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 AC069304.1-201ENST00000491593 704 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 RPL30P11-201ENST00000495304 339 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.88□□□□□ -1.63
ABCD3P28288 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.88□□□□□ -1.63
ABCD3P28288 AC021193.1-201ENST00000511607 420 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 SCARNA21.2-201ENST00000516600 166 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.88□□□□□ -1.63
ABCD3P28288 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.88□□□□□ -1.63
ABCD3P28288 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.88□□□□□ -1.63
ABCD3P28288 DEFB130C-202ENST00000530001 230 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.88□□□□□ -1.63
ABCD3P28288 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.88□□□□□ -1.63
ABCD3P28288 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.88□□□□□ -1.63
ABCD3P28288 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ABCD3P28288 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.88□□□□□ -1.63
ABCD3P28288 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ABCD3P28288 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.88□□□□□ -1.63
ABCD3P28288 OR4U1P-201ENST00000554958 912 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 AC004825.1-201ENST00000555068 586 ntBASIC4.88□□□□□ -1.63
ABCD3P28288 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms