Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGA1P17096 AC097634.1-201ENST00000604491 2467 ntBASIC4.43□□□□□ -1.7
HMGA1P17096 RNA5SP388-201ENST00000362584 119 ntBASIC4.43□□□□□ -1.7
HMGA1P17096 RNA5SP130-201ENST00000364431 114 ntBASIC4.43□□□□□ -1.7
HMGA1P17096 RNA5SP283-201ENST00000365604 119 ntBASIC4.43□□□□□ -1.7
HMGA1P17096 KCTD10P1-201ENST00000434203 625 ntBASIC4.43□□□□□ -1.7
HMGA1P17096 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HMGA1P17096 AL132838.2-201ENST00000492041 314 ntBASIC4.43□□□□□ -1.7
HMGA1P17096 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
HMGA1P17096 AC105233.3-201ENST00000531125 744 ntBASIC4.43□□□□□ -1.7
HMGA1P17096 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGA1P17096 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.43□□□□□ -1.7
HMGA1P17096 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGA1P17096 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HMGA1P17096 AC140113.4-201ENST00000622087 222 ntBASIC4.43□□□□□ -1.7
HMGA1P17096 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.43□□□□□ -1.7
HMGA1P17096 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMGA1P17096 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMGA1P17096 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGA1P17096 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGA1P17096 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGA1P17096 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGA1P17096 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMGA1P17096 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGA1P17096 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
HMGA1P17096 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGA1P17096 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGA1P17096 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HMGA1P17096 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGA1P17096 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.42□□□□□ -1.7
HMGA1P17096 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGA1P17096 RAB9AP4-201ENST00000415230 609 ntBASIC4.42□□□□□ -1.7
HMGA1P17096 AL117339.2-201ENST00000430475 180 ntBASIC4.42□□□□□ -1.7
HMGA1P17096 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGA1P17096 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGA1P17096 RPS27AP15-201ENST00000447672 466 ntBASIC4.42□□□□□ -1.7
HMGA1P17096 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGA1P17096 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGA1P17096 RNA5SP360-201ENST00000516555 118 ntBASIC4.42□□□□□ -1.7
HMGA1P17096 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGA1P17096 AC010608.2-201ENST00000624830 470 ntBASIC4.42□□□□□ -1.7
HMGA1P17096 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.42□□□□□ -1.7
HMGA1P17096 MAPK10-303ENST00000641324 3959 ntBASIC4.42□□□□□ -1.7
HMGA1P17096 AL031595.2-201ENST00000624215 19071 ntBASIC4.42□□□□□ -1.7
HMGA1P17096 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGA1P17096 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGA1P17096 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HMGA1P17096 AC027228.2-201ENST00000567141 2154 ntBASIC4.41□□□□□ -1.7
HMGA1P17096 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGA1P17096 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGA1P17096 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGA1P17096 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGA1P17096 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGA1P17096 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGA1P17096 RN7SKP74-201ENST00000362849 309 ntBASIC4.41□□□□□ -1.7
HMGA1P17096 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGA1P17096 CASKP1-201ENST00000412870 582 ntBASIC4.41□□□□□ -1.7
HMGA1P17096 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGA1P17096 AC122718.1-201ENST00000439448 744 ntBASIC4.41□□□□□ -1.7
HMGA1P17096 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGA1P17096 AC006326.1-201ENST00000445465 787 ntBASIC4.41□□□□□ -1.7
HMGA1P17096 FAM133DP-201ENST00000464802 691 ntBASIC4.41□□□□□ -1.7
HMGA1P17096 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
HMGA1P17096 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGA1P17096 NPM1P21-201ENST00000513394 762 ntBASIC4.41□□□□□ -1.7
HMGA1P17096 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGA1P17096 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.41□□□□□ -1.7
HMGA1P17096 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGA1P17096 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGA1P17096 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGA1P17096 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGA1P17096 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.41□□□□□ -1.7
HMGA1P17096 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGA1P17096 MIR7151-201ENST00000617477 60 ntBASIC4.41□□□□□ -1.7
HMGA1P17096 AC019278.1-201ENST00000623516 479 ntBASIC4.41□□□□□ -1.7
HMGA1P17096 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGA1P17096 AP005435.3-201ENST00000531260 3198 ntBASIC4.41□□□□□ -1.7
HMGA1P17096 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGA1P17096 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGA1P17096 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HMGA1P17096 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HMGA1P17096 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGA1P17096 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HMGA1P17096 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGA1P17096 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGA1P17096 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGA1P17096 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGA1P17096 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HMGA1P17096 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HMGA1P17096 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMGA1P17096 AC007998.4-201ENST00000612496 2533 ntBASIC4.4□□□□□ -1.7
HMGA1P17096 AC010266.2-201ENST00000564741 3255 ntBASIC4.4□□□□□ -1.7
HMGA1P17096 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HMGA1P17096 IQCB2P-201ENST00000401788 1633 ntBASIC4.4□□□□□ -1.7
HMGA1P17096 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
HMGA1P17096 RNA5SP22-201ENST00000365393 109 ntBASIC4.4□□□□□ -1.71
HMGA1P17096 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGA1P17096 RNU11-4P-201ENST00000391149 133 ntBASIC4.4□□□□□ -1.71
HMGA1P17096 ENSAP1-201ENST00000392855 326 ntBASIC4.4□□□□□ -1.71
HMGA1P17096 RPL32P23-201ENST00000397237 405 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms