Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RHOT1P3-201ENST00000436571 331 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 TCEA1P3-201ENST00000443005 880 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 KNOP1P3-201ENST00000446933 426 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 MRPL35P2-201ENST00000448009 511 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AL035407.2-201ENST00000454090 378 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 RPL7P32-201ENST00000457119 744 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC005532.2-201ENST00000467154 373 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 HMGN2P25-201ENST00000486956 268 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC093534.1-201ENST00000504977 132 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC008837.1-201ENST00000511513 412 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 RNA5SP34-201ENST00000516887 130 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 HMGB1P1-201ENST00000522557 636 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 CCDC58P3-201ENST00000590792 430 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC245036.5-201ENST00000596330 847 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 TAS2R6P-201ENST00000605022 826 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC005377.1-201ENST00000605126 456 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AL135786.2-201ENST00000608422 615 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC096586.1-201ENST00000610267 561 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AL627230.1-201ENST00000613077 211 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AL591926.8-201ENST00000616876 211 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 AL355493.4-201ENST00000618530 292 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 BX005214.3-202ENST00000619809 325 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AP000648.2-201ENST00000624182 404 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC019226.2-201ENST00000625973 424 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC017104.5-201ENST00000637647 639 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC073869.10-201ENST00000642016 354 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DOBP13765 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DOBP13765 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DOBP13765 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DOBP13765 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DOBP13765 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DOBP13765 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DOBP13765 RNA5SP455-201ENST00000365190 119 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 RNU6-452P-201ENST00000384406 107 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 RNU6-1320P-201ENST00000390838 107 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 SNORD65C-201ENST00000390962 71 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 RNU6-1269P-201ENST00000391139 107 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 LRRC37BP1-201ENST00000398851 714 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DOBP13765 AL021331.1-201ENST00000402817 582 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 AL034374.1-201ENST00000406329 351 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 AC105402.1-201ENST00000413336 545 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 RPS29P9-201ENST00000440360 171 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 AL354714.3-201ENST00000447284 493 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DOBP13765 AC093166.2-201ENST00000455969 1017 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 RNU6-599P-201ENST00000459383 107 ntBASIC4.48□□□□□ -1.69
HLA-DOBP13765 RNU6-1193P-201ENST00000459461 107 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms