Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC091564.1-201ENST00000464563 479 ntBASIC7.35□□□□□ -1.23
TOP2AP11388 ATP6V1G1P6-201ENST00000504007 334 ntBASIC7.35□□□□□ -1.23
TOP2AP11388 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC7.35□□□□□ -1.23
TOP2AP11388 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC7.35□□□□□ -1.23
TOP2AP11388 YPEL5P3-201ENST00000547227 352 ntBASIC7.35□□□□□ -1.23
TOP2AP11388 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC7.35□□□□□ -1.23
TOP2AP11388 AC107982.3-201ENST00000584957 985 ntBASIC7.35□□□□□ -1.23
TOP2AP11388 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TOP2AP11388 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
TOP2AP11388 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TOP2AP11388 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TOP2AP11388 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TOP2AP11388 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
TOP2AP11388 AC126323.6-202ENST00000568092 3511 ntBASIC7.35□□□□□ -1.23
TOP2AP11388 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
TOP2AP11388 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TOP2AP11388 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC7.34□□□□□ -1.23
TOP2AP11388 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
TOP2AP11388 RNA5SP387-201ENST00000364226 106 ntBASIC7.34□□□□□ -1.23
TOP2AP11388 RNU6-213P-201ENST00000384051 104 ntBASIC7.34□□□□□ -1.23
TOP2AP11388 RNU6-761P-201ENST00000384148 107 ntBASIC7.34□□□□□ -1.23
TOP2AP11388 AL607077.1-201ENST00000401718 499 ntBASIC7.34□□□□□ -1.23
TOP2AP11388 UBTFL3-201ENST00000418934 1024 ntBASIC7.34□□□□□ -1.23
TOP2AP11388 AC006011.1-201ENST00000442758 349 ntBASIC7.34□□□□□ -1.23
TOP2AP11388 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC7.34□□□□□ -1.23
TOP2AP11388 PRSS3P4-201ENST00000453323 162 ntBASIC7.34□□□□□ -1.23
TOP2AP11388 UBTFL6-201ENST00000477929 1024 ntBASIC7.34□□□□□ -1.23
TOP2AP11388 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.34□□□□□ -1.23
TOP2AP11388 AC008966.2-201ENST00000606157 453 ntBASIC7.34□□□□□ -1.23
TOP2AP11388 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.34□□□□□ -1.23
TOP2AP11388 CR392039.5-201ENST00000623201 510 ntBASIC7.34□□□□□ -1.23
TOP2AP11388 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
TOP2AP11388 FAP-203ENST00000443424 2598 ntTSL 2 BASIC7.34□□□□□ -1.23
TOP2AP11388 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC7.33□□□□□ -1.24
TOP2AP11388 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.33□□□□□ -1.24
TOP2AP11388 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TOP2AP11388 RPS4XP4-201ENST00000443195 763 ntBASIC7.33□□□□□ -1.24
TOP2AP11388 AC090151.1-201ENST00000520784 730 ntBASIC7.33□□□□□ -1.24
TOP2AP11388 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC7.33□□□□□ -1.24
TOP2AP11388 AC112230.1-201ENST00000604342 547 ntBASIC7.33□□□□□ -1.24
TOP2AP11388 AC099669.2-201ENST00000616549 437 ntBASIC7.33□□□□□ -1.24
TOP2AP11388 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TOP2AP11388 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TOP2AP11388 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC7.33□□□□□ -1.24
TOP2AP11388 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC7.33□□□□□ -1.24
TOP2AP11388 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
TOP2AP11388 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TOP2AP11388 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.33□□□□□ -1.24
TOP2AP11388 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TOP2AP11388 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TOP2AP11388 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
TOP2AP11388 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TOP2AP11388 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
TOP2AP11388 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.33□□□□□ -1.24
TOP2AP11388 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.33□□□□□ -1.24
TOP2AP11388 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
TOP2AP11388 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TOP2AP11388 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
TOP2AP11388 ACEA_U3.1-201ENST00000363057 217 ntBASIC7.32□□□□□ -1.24
TOP2AP11388 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC7.32□□□□□ -1.24
TOP2AP11388 AC093815.1-201ENST00000508637 280 ntBASIC7.32□□□□□ -1.24
TOP2AP11388 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC7.32□□□□□ -1.24
TOP2AP11388 AC024220.1-201ENST00000603675 484 ntBASIC7.32□□□□□ -1.24
TOP2AP11388 AL592436.1-201ENST00000605135 558 ntBASIC7.32□□□□□ -1.24
TOP2AP11388 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
TOP2AP11388 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC7.32□□□□□ -1.24
TOP2AP11388 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC7.32□□□□□ -1.24
TOP2AP11388 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC7.32□□□□□ -1.24
TOP2AP11388 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
TOP2AP11388 AC016588.2-201ENST00000632484 3021 ntBASIC7.32□□□□□ -1.24
TOP2AP11388 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
TOP2AP11388 RNA5SP119-201ENST00000362715 117 ntBASIC7.32□□□□□ -1.24
TOP2AP11388 SNORA73.2-201ENST00000364946 201 ntBASIC7.32□□□□□ -1.24
TOP2AP11388 AL672167.2-201ENST00000377164 879 ntBASIC7.32□□□□□ -1.24
TOP2AP11388 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.32□□□□□ -1.24
TOP2AP11388 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.32□□□□□ -1.24
TOP2AP11388 OR5BE1P-201ENST00000425977 939 ntBASIC7.32□□□□□ -1.24
TOP2AP11388 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC7.32□□□□□ -1.24
TOP2AP11388 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.32□□□□□ -1.24
TOP2AP11388 AC110792.1-201ENST00000491826 472 ntBASIC7.32□□□□□ -1.24
TOP2AP11388 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC7.32□□□□□ -1.24
TOP2AP11388 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC7.32□□□□□ -1.24
TOP2AP11388 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.32□□□□□ -1.24
TOP2AP11388 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.32□□□□□ -1.24
TOP2AP11388 AC027455.1-201ENST00000574104 594 ntBASIC7.32□□□□□ -1.24
TOP2AP11388 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
TOP2AP11388 OR5BE1P-202ENST00000641168 1176 ntBASIC7.32□□□□□ -1.24
TOP2AP11388 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TOP2AP11388 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC7.31□□□□□ -1.24
TOP2AP11388 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.31□□□□□ -1.24
TOP2AP11388 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
TOP2AP11388 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC7.31□□□□□ -1.24
TOP2AP11388 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TOP2AP11388 NPM1P36-201ENST00000415681 835 ntBASIC7.31□□□□□ -1.24
TOP2AP11388 RPL36AP10-201ENST00000421785 322 ntBASIC7.31□□□□□ -1.24
TOP2AP11388 RPS11P1-201ENST00000451072 473 ntBASIC7.31□□□□□ -1.24
TOP2AP11388 AL445433.1-201ENST00000457507 257 ntBASIC7.31□□□□□ -1.24
TOP2AP11388 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC7.31□□□□□ -1.24
TOP2AP11388 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.31□□□□□ -1.24
TOP2AP11388 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms