Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.97□□□□□ -1.61
CLDN3O15551 IGHV3-63-201ENST00000518422 341 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CLDN3O15551 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN3O15551 RPL12P25-202ENST00000598100 674 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 AC008782.1-201ENST00000603386 430 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 HMGB1P51-201ENST00000605166 638 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN3O15551 AC002044.3-201ENST00000623314 541 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 AP002967.1-201ENST00000624203 539 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN3O15551 LINC01808-202ENST00000641680 1116 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CLDN3O15551 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN3O15551 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN3O15551 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN3O15551 OR56B2P-202ENST00000641377 2453 ntBASIC4.97□□□□□ -1.61
CLDN3O15551 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN3O15551 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
CLDN3O15551 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN3O15551 RAD17P1-201ENST00000418130 2042 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN3O15551 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
CLDN3O15551 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CLDN3O15551 MIR659-201ENST00000384963 97 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 SNORA68.2-201ENST00000391263 128 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 AL139039.2-201ENST00000407436 479 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN3O15551 RNU6-564P-201ENST00000410983 104 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN3O15551 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN3O15551 AL590806.1-201ENST00000415818 853 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 RPL12P28-201ENST00000430852 489 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 UBE2V2P3-201ENST00000433562 437 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 CACYBPP1-201ENST00000438592 684 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 AL450263.2-201ENST00000439400 589 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 MTND2P28-201ENST00000457540 1044 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN3O15551 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN3O15551 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN3O15551 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN3O15551 AP000827.1-201ENST00000527814 258 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN3O15551 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN3O15551 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN3O15551 MIR4715-201ENST00000584117 79 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 ADAD1P2-201ENST00000588476 646 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 AC068790.4-201ENST00000602474 263 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 AC034236.3-201ENST00000605999 461 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 SNORD91B-202ENST00000608459 222 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN3O15551 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN3O15551 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN3O15551 AL137100.1-201ENST00000556703 1620 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN3O15551 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN3O15551 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN3O15551 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN3O15551 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN3O15551 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.96□□□□□ -1.62
CLDN3O15551 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CLDN3O15551 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CLDN3O15551 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
CLDN3O15551 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
CLDN3O15551 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN3O15551 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.95□□□□□ -1.62
CLDN3O15551 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN3O15551 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN3O15551 RNU1-32P-201ENST00000363937 159 ntBASIC4.95□□□□□ -1.62
CLDN3O15551 RN7SKP224-201ENST00000364140 325 ntBASIC4.95□□□□□ -1.62
CLDN3O15551 RN7SKP216-201ENST00000411050 312 ntBASIC4.95□□□□□ -1.62
CLDN3O15551 AL807761.1-201ENST00000417622 171 ntBASIC4.95□□□□□ -1.62
CLDN3O15551 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN3O15551 RPS27AP7-201ENST00000422792 455 ntBASIC4.95□□□□□ -1.62
CLDN3O15551 AC009480.2-201ENST00000422916 432 ntBASIC4.95□□□□□ -1.62
CLDN3O15551 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.95□□□□□ -1.62
CLDN3O15551 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN3O15551 ARL5AP3-201ENST00000439327 386 ntBASIC4.95□□□□□ -1.62
CLDN3O15551 H2AFZP6-201ENST00000444403 394 ntBASIC4.95□□□□□ -1.62
CLDN3O15551 CALM1P2-201ENST00000452941 448 ntBASIC4.95□□□□□ -1.62
CLDN3O15551 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.95□□□□□ -1.62
CLDN3O15551 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.95□□□□□ -1.62
CLDN3O15551 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.95□□□□□ -1.62
CLDN3O15551 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.95□□□□□ -1.62
CLDN3O15551 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.95□□□□□ -1.62
CLDN3O15551 AC005086.4-201ENST00000623065 213 ntBASIC4.95□□□□□ -1.62
CLDN3O15551 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.95□□□□□ -1.62
CLDN3O15551 MIR7641-1-201ENST00000627518 61 ntBASIC4.95□□□□□ -1.62
CLDN3O15551 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.95□□□□□ -1.62
CLDN3O15551 MAPK10-286ENST00000641208 8747 ntBASIC4.95□□□□□ -1.62
CLDN3O15551 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN3O15551 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN3O15551 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN3O15551 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN3O15551 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.95□□□□□ -1.62
CLDN3O15551 AC007342.7-201ENST00000624610 2337 ntBASIC4.95□□□□□ -1.62
CLDN3O15551 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLDN3O15551 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.95□□□□□ -1.62
CLDN3O15551 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms