Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
UPK1AO00322 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.15□□□□□ -1.75
UPK1AO00322 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.15□□□□□ -1.75
UPK1AO00322 RPL7AP25-201ENST00000423357 805 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 NANOGP6-201ENST00000429190 847 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 ELOCP18-201ENST00000434209 337 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK1AO00322 ELOCP8-201ENST00000439309 332 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 ELOCP15-201ENST00000442090 332 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK1AO00322 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK1AO00322 ABCF2P2-201ENST00000450549 296 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 VN1R32P-201ENST00000452234 905 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK1AO00322 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.15□□□□□ -1.75
UPK1AO00322 RPS27AP17-201ENST00000463344 455 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.15□□□□□ -1.75
UPK1AO00322 OR52A4P-201ENST00000472867 958 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 AC098583.1-201ENST00000480875 255 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.15□□□□□ -1.75
UPK1AO00322 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 AC139783.2-201ENST00000504847 1145 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK1AO00322 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK1AO00322 OR5M7P-201ENST00000526140 972 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK1AO00322 DYNLL1P4-201ENST00000549314 266 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 AC063949.1-201ENST00000552900 865 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 AC084783.1-201ENST00000565846 910 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.15□□□□□ -1.75
UPK1AO00322 AC008782.1-201ENST00000603386 430 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 AC115286.1-201ENST00000604298 434 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 AL023881.1-201ENST00000621088 301 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 AC006065.6-201ENST00000625201 545 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.15□□□□□ -1.75
UPK1AO00322 AC009950.2-201ENST00000636548 183 ntBASIC4.15□□□□□ -1.75
UPK1AO00322 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.15□□□□□ -1.75
UPK1AO00322 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
UPK1AO00322 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.15□□□□□ -1.75
UPK1AO00322 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
UPK1AO00322 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
UPK1AO00322 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.15□□□□□ -1.75
UPK1AO00322 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
UPK1AO00322 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
UPK1AO00322 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
UPK1AO00322 AC027228.2-201ENST00000567141 2154 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UPK1AO00322 MFSD8-216ENST00000641147 4009 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
UPK1AO00322 RAD17P1-201ENST00000418130 2042 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPK1AO00322 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.14□□□□□ -1.75
UPK1AO00322 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
UPK1AO00322 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.14□□□□□ -1.75
UPK1AO00322 CUL4AP1-201ENST00000514750 1863 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPK1AO00322 AL672167.2-201ENST00000377164 879 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 RPS16P5-201ENST00000406501 404 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 SNORA79B-201ENST00000410557 148 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UPK1AO00322 AC069213.2-201ENST00000420238 366 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.14□□□□□ -1.75
UPK1AO00322 AC006065.1-201ENST00000422539 802 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.14□□□□□ -1.75
UPK1AO00322 RPEP3-201ENST00000425462 676 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.14□□□□□ -1.75
UPK1AO00322 NDUFA5P1-201ENST00000433858 341 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.14□□□□□ -1.75
UPK1AO00322 UBE2V1P3-201ENST00000439651 417 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.14□□□□□ -1.75
UPK1AO00322 ARL2BPP10-201ENST00000446487 531 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 AL451050.1-201ENST00000450126 415 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.14□□□□□ -1.75
UPK1AO00322 RPL23AP72-201ENST00000492447 435 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.14□□□□□ -1.75
UPK1AO00322 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.14□□□□□ -1.75
UPK1AO00322 PARP4P3-201ENST00000510265 317 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 HNRNPKP5-201ENST00000515300 253 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 PHBP17-201ENST00000528576 541 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.14□□□□□ -1.75
UPK1AO00322 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.14□□□□□ -1.75
UPK1AO00322 AC234775.3-201ENST00000564612 656 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.14□□□□□ -1.75
UPK1AO00322 Z98200.1-201ENST00000607298 470 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 AC022960.2-201ENST00000616300 666 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 AP005019.3-201ENST00000620418 560 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.14□□□□□ -1.75
UPK1AO00322 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UPK1AO00322 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
UPK1AO00322 AL592148.3-201ENST00000608771 2646 ntBASIC4.14□□□□□ -1.75
UPK1AO00322 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
UPK1AO00322 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
UPK1AO00322 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UPK1AO00322 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
UPK1AO00322 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.13□□□□□ -1.75
UPK1AO00322 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.13□□□□□ -1.75
UPK1AO00322 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.13□□□□□ -1.75
UPK1AO00322 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
UPK1AO00322 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.13□□□□□ -1.75
UPK1AO00322 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms