Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM1O00151 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM1O00151 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PDLIM1O00151 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.55□□□□□ -1.68
PDLIM1O00151 RWDD4P2-201ENST00000426392 563 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 AL590623.1-201ENST00000427864 105 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 MRPS33P4-201ENST00000434892 317 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 FHP1-201ENST00000442741 703 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.55□□□□□ -1.68
PDLIM1O00151 AC099063.2-201ENST00000446360 662 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM1O00151 NDUFS5P3-201ENST00000450668 321 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 AC243772.1-201ENST00000451620 410 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.55□□□□□ -1.68
PDLIM1O00151 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.55□□□□□ -1.68
PDLIM1O00151 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.55□□□□□ -1.68
PDLIM1O00151 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.55□□□□□ -1.68
PDLIM1O00151 RPS18P6-201ENST00000476880 458 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 AC090114.3-201ENST00000479267 829 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 LARP7P4-201ENST00000481075 878 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 RWDD4P1-201ENST00000488019 565 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 RN7SL558P-201ENST00000497468 299 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 ACTR6P1-201ENST00000514311 1104 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 IGHV3-63-201ENST00000518422 341 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.55□□□□□ -1.68
PDLIM1O00151 IGLV3-26-201ENST00000520756 302 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 OR8X1P-201ENST00000534542 869 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.55□□□□□ -1.68
PDLIM1O00151 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.55□□□□□ -1.68
PDLIM1O00151 AL352979.3-201ENST00000553515 247 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.55□□□□□ -1.68
PDLIM1O00151 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.55□□□□□ -1.68
PDLIM1O00151 AC012414.7-202ENST00000622705 1090 ntBASIC4.55□□□□□ -1.68
PDLIM1O00151 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM1O00151 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PDLIM1O00151 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
PDLIM1O00151 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM1O00151 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM1O00151 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM1O00151 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDLIM1O00151 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM1O00151 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM1O00151 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.54□□□□□ -1.68
PDLIM1O00151 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PDLIM1O00151 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM1O00151 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.54□□□□□ -1.68
PDLIM1O00151 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.54□□□□□ -1.68
PDLIM1O00151 RNA5SP507-201ENST00000363603 121 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.54□□□□□ -1.68
PDLIM1O00151 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.54□□□□□ -1.68
PDLIM1O00151 AL138878.1-201ENST00000405131 347 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.54□□□□□ -1.68
PDLIM1O00151 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.54□□□□□ -1.68
PDLIM1O00151 RSL24D1P8-201ENST00000434442 492 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 AP000936.3-201ENST00000438127 255 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 AL035551.1-201ENST00000446931 348 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 AL513343.1-201ENST00000451818 792 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.54□□□□□ -1.68
PDLIM1O00151 AC069277.2-201ENST00000454211 432 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 AP002345.1-201ENST00000456493 928 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 PSMC1P13-201ENST00000458195 985 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.54□□□□□ -1.68
PDLIM1O00151 S100A11P1-201ENST00000477525 312 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 OR52A4P-202ENST00000481634 799 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.54□□□□□ -1.68
PDLIM1O00151 AC010350.1-201ENST00000504908 231 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.54□□□□□ -1.68
PDLIM1O00151 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.54□□□□□ -1.68
PDLIM1O00151 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.54□□□□□ -1.68
PDLIM1O00151 HMGN2P6-201ENST00000551091 273 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.54□□□□□ -1.68
PDLIM1O00151 AC012414.2-201ENST00000559474 187 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 MIR3691-201ENST00000578066 90 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.54□□□□□ -1.68
PDLIM1O00151 AC110741.2-201ENST00000605278 268 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 COX6CP4-201ENST00000605798 228 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 HMGB1P50-201ENST00000605814 607 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 MIR7155-201ENST00000615925 56 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 AL049794.2-201ENST00000616301 365 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 AC009032.1-201ENST00000617574 431 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM1O00151 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.54□□□□□ -1.68
PDLIM1O00151 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM1O00151 AC132825.1-201ENST00000463573 2247 ntBASIC4.54□□□□□ -1.68
PDLIM1O00151 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM1O00151 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PDLIM1O00151 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PDLIM1O00151 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PDLIM1O00151 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
PDLIM1O00151 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM1O00151 SAMMSON-226ENST00000642089 1582 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDLIM1O00151 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.53□□□□□ -1.68
PDLIM1O00151 AC018555.1-201ENST00000567548 1980 ntBASIC4.53□□□□□ -1.68
PDLIM1O00151 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PDLIM1O00151 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.53□□□□□ -1.68
PDLIM1O00151 SNURFL-201ENST00000309296 343 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms