Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
TMX2-CTNND1H3BSU7 AC107068.1-201ENST00000563286 4218 ntBASIC4.46□□□□□ -1.69
TMX2-CTNND1H3BSU7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TMX2-CTNND1H3BSU7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 MTND4P26-201ENST00000415971 1359 ntBASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL590762.2-201ENST00000395798 571 ntBASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 RN7SKP167-201ENST00000411047 285 ntBASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC004975.1-201ENST00000428733 208 ntBASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 YWHAZP2-201ENST00000440317 728 ntBASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 RN7SL303P-201ENST00000469773 251 ntBASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 RPL36AP41-201ENST00000493820 306 ntBASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC007016.1-201ENST00000512110 244 ntBASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL354950.1-201ENST00000614150 568 ntBASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL121890.3-201ENST00000618494 516 ntBASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 NEAT1-202ENST00000501122 22743 ntBASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 DDX18P3-201ENST00000404856 2007 ntBASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TMX2-CTNND1H3BSU7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC025031.4-201ENST00000621248 3271 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 KPNA2P2-201ENST00000419546 1489 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 OR6C69P-201ENST00000394268 893 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL121834.1-202ENST00000404494 277 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 SNORA11-201ENST00000408789 128 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL160275.2-201ENST00000412010 394 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL161747.1-201ENST00000480068 358 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC098799.3-201ENST00000506095 438 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 RN7SKP21-201ENST00000516503 220 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC103792.1-201ENST00000603591 919 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC012409.3-201ENST00000611343 981 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 OR8G7P-201ENST00000616658 848 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC068831.8-201ENST00000620171 435 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC011944.2-201ENST00000624440 683 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 DDX18P5-201ENST00000534547 1306 ntBASIC4.45□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC092435.4-201ENST00000623012 4159 ntBASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 RN7SKP263-201ENST00000411194 309 ntBASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 MIR2116-201ENST00000517221 80 ntBASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL109766.1-201ENST00000555080 552 ntBASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 MIR3939-201ENST00000582614 106 ntBASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 KPNA2P3-201ENST00000584190 848 ntBASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC068724.3-201ENST00000625906 87 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms