Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
SSX2IPQ9Y2D8 AC092747.4-201ENST00000620519 1861 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 SCARNA15-201ENST00000607520 4325 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 MIR513B-201ENST00000385136 84 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AL078599.1-201ENST00000402075 293 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 RPL7P27-201ENST00000403775 720 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 DDX39BP1-205ENST00000422507 192 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AC010099.3-201ENST00000423896 409 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AC009784.1-201ENST00000426484 460 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AC005189.1-201ENST00000431286 310 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 MTCYBP12-201ENST00000440559 1134 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AL589765.3-201ENST00000446084 462 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 ZNF886P-201ENST00000450781 723 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AL122001.1-201ENST00000457027 370 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 ABCC13-202ENST00000463099 3842 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 RPS4XP6-201ENST00000477670 797 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 BRD9P1-201ENST00000529855 560 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 CCDC58P3-201ENST00000590792 430 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 PCNAP1-202ENST00000595299 752 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AC067838.1-201ENST00000606064 577 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 MIR6820-201ENST00000611508 62 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AC100827.5-201ENST00000615883 426 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AC091905.4-201ENST00000623432 202 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AC112694.2-201ENST00000623697 768 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 AC026422.1-201ENST00000623961 452 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 MTND4P8-201ENST00000514997 1362 ntBASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.64□□□□□ -1.51
SSX2IPQ9Y2D8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 RNU6-236P-201ENST00000363886 106 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 SNORA70.6-201ENST00000383934 134 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 OR8V1P-201ENST00000395193 873 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 LRRC37BP1-201ENST00000398851 714 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 RN7SKP216-201ENST00000411050 312 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AL449283.1-202ENST00000418249 604 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 KRR1P1-201ENST00000419430 803 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 PTP4A1P1-201ENST00000420539 515 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 OR2X1P-201ENST00000421144 687 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 FABP7P2-201ENST00000429946 379 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 NDUFA5P10-201ENST00000432147 357 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms