Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 EEF1A1P24-201ENST00000451469 1378 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 RNU6-932P-201ENST00000391108 106 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AMD1P2-201ENST00000412936 992 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC016769.2-201ENST00000414815 475 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 Z99127.2-201ENST00000441426 334 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 DDX39BP2-208ENST00000453923 258 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC022415.1-202ENST00000486612 523 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC104109.1-201ENST00000498563 436 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC105914.1-201ENST00000511798 226 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 ODF1-202ENST00000518835 368 ntTSL 3 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AL133399.1-201ENST00000527476 298 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AL162632.2-201ENST00000553933 399 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 GTF2IP22-201ENST00000554443 182 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC090826.1-203ENST00000569235 490 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 NRBF2P5-201ENST00000603087 788 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC018692.2-201ENST00000624130 348 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 BTK-209ENST00000618050 2417 ntTSL 5 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 CASC19-246ENST00000641625 1606 ntBASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC8.24□□□□□ -1.09
PDZRN3Q9UPQ7 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 PABPC1P9-201ENST00000426076 1612 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 snoZ40.1-201ENST00000364540 72 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 Y_RNA.315-201ENST00000365117 102 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 AL354719.1-201ENST00000406535 843 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 RNU6-248P-201ENST00000410720 107 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 RPL21P43-201ENST00000425440 472 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 AL160175.1-201ENST00000428124 247 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 AC097463.1-201ENST00000447288 481 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 CACYBPP2-201ENST00000453625 678 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 SETP20-201ENST00000457046 852 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 Y_RNA.639-201ENST00000458981 102 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 AC105918.1-201ENST00000474399 838 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 SCARNA21.2-201ENST00000516600 166 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 TRIM77BP-201ENST00000524985 1119 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 AL117187.1-201ENST00000555482 181 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 AC011445.2-201ENST00000599274 173 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 XIAPP1-201ENST00000603162 600 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 OR7M1P-201ENST00000608946 533 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 AC006504.8-201ENST00000621046 635 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 TTC39DP-201ENST00000416781 1688 ntBASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
PDZRN3Q9UPQ7 AC010624.4-201ENST00000597606 1351 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 ATP8A2P2-201ENST00000437678 1568 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 LINC00622-201ENST00000562811 1570 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms