Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 OR10J6P-201ENST00000289731 930 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 RN7SKP182-201ENST00000410772 298 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 USP24P1-201ENST00000433802 779 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 NPM1P13-201ENST00000452663 865 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC121761.2-201ENST00000617300 689 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AL603750.1-201ENST00000624216 1717 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 AC063976.2-201ENST00000425667 3556 ntBASIC1.76□□□□□ -2.13
MACF1Q9UPN3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MACF1Q9UPN3 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 SNORA70H-201ENST00000383910 135 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AL133162.1-201ENST00000463228 453 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 RPS24P16-201ENST00000497294 392 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC104619.4-201ENST00000510773 249 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 RNU6-991P-201ENST00000516168 107 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC027176.2-201ENST00000559166 746 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 CSNK1A1P1-202ENST00000563423 981 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AL163642.2-201ENST00000604722 1019 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 SAMMSON-213ENST00000641336 1521 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC079097.1-201ENST00000512187 1399 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AL445529.1-201ENST00000398713 389 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 RPS4XP4-201ENST00000443195 763 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 RPS11P1-201ENST00000451072 473 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 RPL36AP21-201ENST00000490372 323 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 Y_RNA.719-201ENST00000517156 106 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 TCP1P3-201ENST00000414406 1498 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 ATP5F1P6-201ENST00000402768 767 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 NPM1P11-201ENST00000417106 855 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC009238.2-201ENST00000431026 355 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 snoU13.26-201ENST00000459452 105 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC112206.1-201ENST00000468416 477 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC007066.2-202ENST00000566531 914 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 RNU1-30P-201ENST00000606575 163 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AL021997.2-201ENST00000615674 271 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 MIR6891-201ENST00000618788 93 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 U3.53-201ENST00000628922 216 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC105074.1-201ENST00000623380 3095 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 Z74021.1-201ENST00000423610 407 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AL031736.2-201ENST00000426573 787 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 RPL21P23-201ENST00000446654 460 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC106707.2-201ENST00000484182 374 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC019227.1-201ENST00000526902 510 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 AC011447.7-201ENST00000624228 1590 ntBASIC1.75□□□□□ -2.13
MACF1Q9UPN3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
MACF1Q9UPN3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms