Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 RNA5SP366-201ENST00000365454 123 ntBASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 KCTD10P1-201ENST00000434203 625 ntBASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 RPL7P32-201ENST00000457119 744 ntBASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 AC010618.1-201ENST00000469924 477 ntBASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 ARL4AP1-201ENST00000503220 705 ntBASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 AC010374.1-201ENST00000503762 1237 ntBASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 AC138409.2-202ENST00000507274 458 ntBASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 AC093840.1-201ENST00000511599 336 ntBASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 AL352979.3-201ENST00000553515 247 ntBASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 AL390334.1-201ENST00000556395 450 ntBASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 AC025175.1-201ENST00000606482 759 ntBASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 AC009951.1-201ENST00000623674 2614 ntBASIC5.9□□□□□ -1.47
NPC1L1Q9UHC9 AC112198.2-201ENST00000426589 6996 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 AL672167.1-203ENST00000641299 2975 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 RNA5SP388-201ENST00000362584 119 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 MIR1911-201ENST00000410783 80 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 AC092447.2-201ENST00000435487 669 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 RPS3AP54-201ENST00000435535 734 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 AL512326.1-201ENST00000443050 721 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 RN7SL303P-201ENST00000469773 251 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 AC109327.1-201ENST00000471666 403 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 AC112184.1-201ENST00000505179 312 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 SLC25A15P5-201ENST00000508033 253 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 PGBD4P4-201ENST00000509673 613 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 AC100770.1-201ENST00000532310 322 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 AC008013.2-202ENST00000637965 364 ntBASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NPC1L1Q9UHC9 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 AC021242.1-201ENST00000507315 2035 ntBASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 RNU6-167P-201ENST00000384292 106 ntBASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 SNORA57.1-201ENST00000391227 145 ntBASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 RPS20P14-201ENST00000412545 360 ntBASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 AL356968.2-201ENST00000412769 1257 ntBASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 BTF3P10-201ENST00000433415 495 ntBASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 BNIP3P41-201ENST00000503774 571 ntBASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 AC008958.1-201ENST00000511047 682 ntBASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 RNA5SP360-201ENST00000516555 118 ntBASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 AC138701.1-201ENST00000524329 714 ntBASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 AC006064.5-201ENST00000541782 248 ntBASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 AL392048.1-201ENST00000613946 534 ntBASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NPC1L1Q9UHC9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.87□□□□□ -1.47
NPC1L1Q9UHC9 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms