Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 RPL12P28-201ENST00000430852 489 ntBASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 ARL4AP3-201ENST00000441452 574 ntBASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 OR6C72P-201ENST00000451403 892 ntBASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 HSPE1P22-201ENST00000456856 327 ntBASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 AC013356.1-201ENST00000489027 564 ntBASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 AC133552.5-201ENST00000604266 540 ntBASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 OR7M1P-201ENST00000608946 533 ntBASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 OR51H2P-202ENST00000641424 3046 ntBASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 AC107027.3-201ENST00000565095 3473 ntBASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 CASC19-204ENST00000641001 2055 ntBASIC5.43□□□□□ -1.54
CLIP2Q9UDT6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 MAPK10-320ENST00000641462 6696 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 IGKV7-3-201ENST00000357453 298 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 MIR195-201ENST00000385194 87 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 RPL18P10-201ENST00000425606 538 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 AL732292.1-201ENST00000426692 226 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 C4BPAP2-201ENST00000428434 478 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 YWHAZP2-201ENST00000440317 728 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 TXNP2-201ENST00000443918 295 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 MTND6P32-201ENST00000457611 483 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 SCARNA10-201ENST00000459255 330 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 AC092905.1-201ENST00000467527 949 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 AC025164.1-201ENST00000496249 478 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 AC009643.1-201ENST00000532030 391 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 MIR4284-201ENST00000578924 81 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 AC131238.1-201ENST00000617135 328 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 MIR6758-201ENST00000620653 63 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 AC002044.3-201ENST00000623314 541 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 AP002967.1-201ENST00000624203 539 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 AL450326.2-201ENST00000421913 1962 ntBASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLIP2Q9UDT6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 OR51C1P-202ENST00000641159 1444 ntBASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AL031119.1-201ENST00000404707 1879 ntBASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 RNU4-39P-201ENST00000362455 127 ntBASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 RNA5SP447-201ENST00000363749 119 ntBASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 CYCSP10-201ENST00000417973 294 ntBASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AC005008.1-201ENST00000456151 612 ntBASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AF186190.1-201ENST00000517470 480 ntBASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AC018442.3-201ENST00000523025 183 ntBASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 MIR4277-201ENST00000578298 84 ntBASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AL133243.1-201ENST00000614487 366 ntBASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AL121873.1-201ENST00000616013 524 ntBASIC5.41□□□□□ -1.54
CLIP2Q9UDT6 AC140113.4-201ENST00000622087 222 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms