Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 CYCSP11-201ENST00000436426 315 ntBASIC4.12□□□□□ -1.75
DUX4Q9UBX2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 SEC11B-201ENST00000518383 499 ntBASIC4.12□□□□□ -1.75
DUX4Q9UBX2 IGHV3-63-201ENST00000518422 341 ntBASIC4.12□□□□□ -1.75
DUX4Q9UBX2 BUD31P1-201ENST00000521828 359 ntBASIC4.12□□□□□ -1.75
DUX4Q9UBX2 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 HIGD1AP5-201ENST00000529959 259 ntBASIC4.12□□□□□ -1.75
DUX4Q9UBX2 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 AC087888.1-201ENST00000550884 1254 ntBASIC4.12□□□□□ -1.75
DUX4Q9UBX2 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 AC011453.2-201ENST00000603737 729 ntBASIC4.12□□□□□ -1.75
DUX4Q9UBX2 AL139286.1-201ENST00000604465 483 ntBASIC4.12□□□□□ -1.75
DUX4Q9UBX2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.12□□□□□ -1.75
DUX4Q9UBX2 AC091905.4-201ENST00000623432 202 ntBASIC4.12□□□□□ -1.75
DUX4Q9UBX2 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
DUX4Q9UBX2 SMG1P6-201ENST00000532337 2930 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AL021368.2-201ENST00000606125 5352 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC103591.2-201ENST00000265259 766 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC008549.2-201ENST00000333482 706 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 SNORA73.1-201ENST00000363107 205 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 MIR93-201ENST00000385024 80 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 MIR708-201ENST00000390708 88 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 MIR921-201ENST00000401133 56 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AL136116.2-201ENST00000404020 785 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AP002530.1-201ENST00000405705 684 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 MTCYBP7-201ENST00000419540 1134 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 GAPDHP49-201ENST00000421421 961 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC093716.1-201ENST00000435923 377 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC112498.1-201ENST00000444401 332 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC000111.2-201ENST00000448200 210 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 RPL31P20-201ENST00000449593 360 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AL451050.1-201ENST00000450126 415 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC010733.1-201ENST00000451515 401 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 RPL35AP28-201ENST00000459730 331 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC231760.1-201ENST00000498002 260 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC026688.1-201ENST00000520639 1168 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC021006.3-201ENST00000530771 192 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC100770.1-201ENST00000532310 322 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC087783.2-201ENST00000605070 562 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC019206.1-201ENST00000621938 425 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AL353662.3-201ENST00000625131 237 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 CASC19-284ENST00000642142 1868 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AC009643.2-201ENST00000603543 1448 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DUX4Q9UBX2 AL450326.2-201ENST00000421913 1962 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 DDX18P3-201ENST00000404856 2007 ntBASIC4.11□□□□□ -1.75
DUX4Q9UBX2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
DUX4Q9UBX2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
DUX4Q9UBX2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
DUX4Q9UBX2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.1□□□□□ -1.75
DUX4Q9UBX2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
DUX4Q9UBX2 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
DUX4Q9UBX2 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
DUX4Q9UBX2 RNA5SP52-201ENST00000362448 134 ntBASIC4.1□□□□□ -1.75
DUX4Q9UBX2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.1□□□□□ -1.75
DUX4Q9UBX2 MIR550A3-201ENST00000390735 95 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms