Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL20A1Q9P218 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL20A1Q9P218 RNU6-906P-201ENST00000384700 70 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL20A1Q9P218 AF228730.1-201ENST00000397972 663 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 Z97832.1-201ENST00000402490 328 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 AC092638.1-201ENST00000411966 1275 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 GTF2IP5-201ENST00000414608 731 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 SSR1P2-201ENST00000415208 787 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 GTF2IP3-201ENST00000433887 494 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 CYCSP11-201ENST00000436426 315 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 PTGES3P1-201ENST00000439531 483 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 TXNP5-201ENST00000441043 315 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 AL050341.1-201ENST00000447743 313 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 RNU7-27P-201ENST00000459281 62 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 RPL23AP56-201ENST00000460778 453 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 RPS17P2-201ENST00000461663 408 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 AC096741.1-201ENST00000472250 846 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL20A1Q9P218 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL20A1Q9P218 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 RNA5SP228-201ENST00000516232 133 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 AC006518.2-201ENST00000542513 940 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 EDDM3DP-201ENST00000554692 434 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 AC122134.1-201ENST00000565664 1104 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 MIR548Y-201ENST00000582739 110 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 AC020910.3-201ENST00000603701 874 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 AC024060.1-201ENST00000607052 494 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 MIR6820-201ENST00000611508 62 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 AC009159.2-201ENST00000617603 606 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 HSPA8P14-201ENST00000552265 1805 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 MFSD8-216ENST00000641147 4009 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL20A1Q9P218 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL20A1Q9P218 CCT8P1-201ENST00000413611 1657 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL20A1Q9P218 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 AC004158.1-201ENST00000564508 4319 ntBASIC5.68□□□□□ -1.5
COL20A1Q9P218 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL20A1Q9P218 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.68□□□□□ -1.5
COL20A1Q9P218 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL20A1Q9P218 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL20A1Q9P218 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 SAMMSON-226ENST00000642089 1582 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL20A1Q9P218 CASC19-260ENST00000641828 2001 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 AL450345.1-202ENST00000605741 3881 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL20A1Q9P218 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL20A1Q9P218 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL20A1Q9P218 TAS2R15P-201ENST00000390674 928 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL20A1Q9P218 HMGB3P18-201ENST00000406327 590 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 RN7SKP16-201ENST00000410180 299 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 PCNPP4-201ENST00000414817 517 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 AL449283.1-202ENST00000418249 604 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL20A1Q9P218 AC009506.2-201ENST00000420635 840 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 AC246680.2-201ENST00000422106 389 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 COX6CP13-201ENST00000428703 226 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 AC007559.1-201ENST00000428736 355 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 FTH1P16-201ENST00000435241 552 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 AC002542.1-201ENST00000440683 193 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 RPL5P25-201ENST00000441148 775 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 AL691482.1-201ENST00000453255 87 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms