Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AL137845.2-201ENST00000444292 988 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 GEMIN8P3-201ENST00000445417 720 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 BUD31P2-201ENST00000449374 300 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AC104629.2-201ENST00000468627 598 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 HMGN2P25-201ENST00000486956 268 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 PSMA2P2-201ENST00000504319 686 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AC027338.1-201ENST00000514840 825 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 RNU6-1102P-201ENST00000516149 96 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 SCARNA21.2-201ENST00000516600 166 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 IFITM8P-201ENST00000522529 394 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AC022404.1-201ENST00000555320 273 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AC093249.4-201ENST00000564755 259 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AC079148.1-201ENST00000565944 819 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 OR1AB1P-201ENST00000585564 761 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AC026790.2-201ENST00000606282 430 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AL022401.1-201ENST00000619498 108 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 AL590396.2-201ENST00000636511 1041 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 MIR4302-201ENST00000638058 60 ntBASIC4.5□□□□□ -1.69
NDE1Q9NXR1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.5□□□□□ -1.69
NDE1Q9NXR1 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 MAPK10-304ENST00000641341 3984 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC006971.1-201ENST00000407916 4486 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC067945.1-201ENST00000342609 618 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 RNA5SP183-201ENST00000362452 119 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 RNU1-44P-201ENST00000384453 163 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 LYPLA1P3-201ENST00000402650 695 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AL355143.1-201ENST00000407101 841 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 VN1R8P-201ENST00000407739 893 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 RN7SKP167-201ENST00000411047 285 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AF186996.5-201ENST00000418098 904 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 GLUD1P9-201ENST00000420997 1173 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 RPS3P2-201ENST00000421346 701 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 NANOGP6-201ENST00000429190 847 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AL158053.1-201ENST00000441503 453 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 HMGN1P36-201ENST00000446623 298 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 YWHAEP1-201ENST00000453697 763 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 RPL7P39-201ENST00000481157 744 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC090013.1-201ENST00000485147 480 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 RPS6P4-201ENST00000494693 758 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 CAB39P1-201ENST00000502277 460 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 RNU1-6P-201ENST00000516290 144 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 HMGB1P46-201ENST00000520062 610 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC090312.1-201ENST00000580637 348 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 QTRT1P1-201ENST00000604344 1078 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC105148.1-201ENST00000604961 409 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AL159169.2-201ENST00000610061 1269 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 MIR6837-201ENST00000620884 64 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC015722.2-201ENST00000622210 551 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 OR5AC4P-202ENST00000642086 985 ntBASIC4.49□□□□□ -1.69
NDE1Q9NXR1 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NDE1Q9NXR1 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms