Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 CR392039.4-201ENST00000624968 501 ntBASIC5.21□□□□□ -1.58
NECTIN3Q9NQS3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
NECTIN3Q9NQS3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NECTIN3Q9NQS3 AC144833.1-201ENST00000567953 4089 ntBASIC5.21□□□□□ -1.58
NECTIN3Q9NQS3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NECTIN3Q9NQS3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
NECTIN3Q9NQS3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.21□□□□□ -1.58
NECTIN3Q9NQS3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NECTIN3Q9NQS3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
NECTIN3Q9NQS3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
NECTIN3Q9NQS3 THAP12P5-201ENST00000405864 2275 ntBASIC5.21□□□□□ -1.58
NECTIN3Q9NQS3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.21□□□□□ -1.58
NECTIN3Q9NQS3 OR4F13P-202ENST00000560066 2054 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 TRIM51GP-201ENST00000534741 1350 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 RN7SKP74-201ENST00000362849 309 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 RNA5SP234-201ENST00000363916 119 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 RNA5SP132-201ENST00000364725 118 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 RNU4-28P-201ENST00000364739 141 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 RN7SKP6-201ENST00000364795 319 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 RNU4-2-201ENST00000365668 141 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 MIR551A-201ENST00000385042 96 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 GSTA8P-201ENST00000404253 637 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 RPSAP35-201ENST00000413753 818 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 MTND2P16-201ENST00000419987 799 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC007161.1-204ENST00000423039 460 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 NPM1P24-201ENST00000428039 894 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 MTCO1P3-201ENST00000429327 192 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 NDUFB4P8-201ENST00000435351 367 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC092013.1-201ENST00000438795 332 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC004022.1-201ENST00000447766 1066 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 ATP5LP5-201ENST00000483050 299 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC021193.1-201ENST00000511607 420 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC092747.2-201ENST00000545069 983 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC069366.1-201ENST00000583159 838 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC061975.8-201ENST00000587058 721 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 PCNAP1-202ENST00000595299 752 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC068790.7-201ENST00000602347 528 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC025588.2-201ENST00000604851 466 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 Z99289.3-201ENST00000605586 594 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AL121890.2-201ENST00000617644 465 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 MFSD8-245ENST00000641743 948 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 ASNSP1-204ENST00000641977 1664 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 SGO1P1-201ENST00000603525 1447 ntBASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NECTIN3Q9NQS3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC092162.3-201ENST00000624511 1624 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC025263.3-201ENST00000622965 1396 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 MIR16-1-201ENST00000385271 89 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 SNORA40.2-201ENST00000390847 128 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 SFR1P1-201ENST00000403720 688 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 FCF1P5-201ENST00000406490 482 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 RN7SKP278-201ENST00000410504 342 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 RNU6-575P-201ENST00000411326 105 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 RNU2-6P-201ENST00000411404 190 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms