Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC114947.2-201ENST00000565748 2125 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 U3.3-201ENST00000362986 216 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 RNA5SP90-201ENST00000364801 99 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AC092638.1-201ENST00000411966 1275 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 LINC01347-201ENST00000417964 355 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AC009238.2-201ENST00000431026 355 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 GTF2IP3-201ENST00000433887 494 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 RPL7AP61-201ENST00000443410 636 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 OTX2P1-201ENST00000450956 354 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 HSPE1P22-201ENST00000456856 327 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AC245028.2-201ENST00000458673 253 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 CDH12P2-201ENST00000504393 298 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 CDH12P4-201ENST00000517835 295 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 CDH12P3-201ENST00000517935 295 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 CDH12P1-201ENST00000518435 295 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AC109635.6-201ENST00000525487 1113 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AL049870.4-201ENST00000555741 486 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AP002906.1-201ENST00000603405 233 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 DUXAP3-201ENST00000603616 594 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AC092954.1-201ENST00000609121 445 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AL049539.1-201ENST00000611964 459 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 GVINP1-202ENST00000531871 7271 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AL121950.1-201ENST00000624993 2077 ntBASIC5.35□□□□□ -1.55
USP29Q9HBJ7 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AC092747.4-201ENST00000620519 1861 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AL450345.1-202ENST00000605741 3881 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AC019072.1-201ENST00000604535 1551 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AC131971.1-201ENST00000332881 1482 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 RNY3P9-201ENST00000384727 106 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 MIR105-1-201ENST00000385222 81 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 MIR550A3-201ENST00000390735 95 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AL161722.2-201ENST00000434731 981 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 RPL12P3-201ENST00000440080 396 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 Z83846.1-201ENST00000446798 265 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 SEPT14P24-201ENST00000447236 180 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 OR7E128P-201ENST00000532736 1024 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AC093591.2-201ENST00000565254 3843 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AC023824.3-201ENST00000569003 562 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AC127024.5-201ENST00000580085 462 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AP005262.1-201ENST00000582646 997 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AC095055.1-201ENST00000603472 1113 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AC079610.2-201ENST00000604818 690 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 TAS2R6P-201ENST00000605022 826 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AC107952.2-201ENST00000606048 486 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AC231759.1-201ENST00000616455 597 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AL121890.3-201ENST00000618494 516 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AC139713.2-210ENST00000641741 992 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 AC004817.4-201ENST00000602396 3625 ntBASIC5.34□□□□□ -1.55
USP29Q9HBJ7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms