Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AP001804.2-201ENST00000533932 910 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 ANP32BP3-201ENST00000559213 706 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC125494.2-201ENST00000602431 657 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC012065.4-201ENST00000602445 679 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC112220.3-201ENST00000605502 502 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC004890.3-201ENST00000605566 1095 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC098614.4-201ENST00000607601 462 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC097641.3-201ENST00000613523 464 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 MIR6071-201ENST00000616741 78 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 RFPL4AP6-201ENST00000616792 846 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC073593.1-201ENST00000624500 411 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC015726.3-201ENST00000624501 418 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SEC61A2Q9H9S3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 GNG5P2-201ENST00000372054 207 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 RPL23AP17-201ENST00000401064 499 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 CYCSP45-201ENST00000402289 315 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AL121835.1-201ENST00000404250 354 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 RPL7P30-201ENST00000420888 709 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AC009480.2-201ENST00000422916 432 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AC007679.3-201ENST00000434035 414 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AL731534.1-201ENST00000434711 269 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AC093716.1-201ENST00000435923 377 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AC023141.3-201ENST00000436698 278 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AL512593.1-201ENST00000444758 779 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 NFU1P2-201ENST00000448700 469 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 RPL23AP60-201ENST00000450011 454 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 HMGB1P7-201ENST00000450921 612 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AMD1P1-201ENST00000457220 922 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 CYP4F27P-201ENST00000514557 494 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AC006512.2-201ENST00000543250 486 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AL845552.1-201ENST00000556820 323 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 SEPT7P9-203ENST00000604116 343 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AL499605.1-201ENST00000604628 403 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AL158211.4-201ENST00000606988 584 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 AC092681.3-201ENST00000609463 678 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms