Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 RNA5SP249-201ENST00000516127 99 ntBASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 GCSHP4-201ENST00000538792 439 ntBASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 AC008033.2-201ENST00000542626 177 ntBASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 MIR4700-201ENST00000578311 74 ntBASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 VN1R79P-201ENST00000593540 513 ntBASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 AL022401.1-201ENST00000619498 108 ntBASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 AC073342.3-201ENST00000624211 193 ntBASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 MARK2P15-201ENST00000432204 2186 ntBASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SUDS3Q9H7L9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 XIAPP3-201ENST00000312918 795 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AP000580.1-201ENST00000404439 358 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 CEACAMP8-201ENST00000413902 580 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 FTH1P6-201ENST00000430768 320 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AC073648.4-201ENST00000442655 781 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 MTCO3P17-201ENST00000443775 513 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AC000111.2-201ENST00000448200 210 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 RPL7P31-201ENST00000450192 724 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 RPL23AP56-201ENST00000460778 453 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AC108751.2-201ENST00000469993 231 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AC105918.1-201ENST00000474399 838 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 IGLV2-34-201ENST00000490007 283 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AP001960.1-201ENST00000506494 658 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AC020593.1-201ENST00000507399 299 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 PCNPP1-201ENST00000552501 511 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 EDDM3DP-201ENST00000554692 434 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 SNORA35B-201ENST00000607417 129 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 MIR6748-201ENST00000610433 71 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 AC112694.2-201ENST00000623697 768 ntBASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
SUDS3Q9H7L9 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.62
SUDS3Q9H7L9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SUDS3Q9H7L9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
SUDS3Q9H7L9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
SUDS3Q9H7L9 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.9□□□□□ -1.62
SUDS3Q9H7L9 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 RN7SKP149-201ENST00000363008 344 ntBASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 RN7SKP115-201ENST00000363177 317 ntBASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 RAB9AP4-201ENST00000415230 609 ntBASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 RPL7P28-201ENST00000437739 740 ntBASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 OR52J1P-201ENST00000450596 932 ntBASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 OR51K1P-201ENST00000510214 950 ntBASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 GSTP1P1-201ENST00000548078 319 ntBASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 AL049830.4-201ENST00000555149 351 ntBASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 AC090953.1-201ENST00000604305 1092 ntBASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 AC005084.1-201ENST00000605160 304 ntBASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 AC055839.1-201ENST00000634467 498 ntBASIC4.9□□□□□ -1.63
SUDS3Q9H7L9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms