Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL583835.1-201ENST00000399570 407 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 SNRPFP1-201ENST00000414761 252 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 RPL7AP25-201ENST00000423357 805 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 RPEP3-201ENST00000425462 676 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 RLIMP2-201ENST00000427891 1563 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 EIF2S2P5-201ENST00000457635 968 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 RN7SL385P-201ENST00000468873 276 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 RN7SL41P-201ENST00000476144 297 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 AP000827.1-201ENST00000527814 258 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 CD24P2-201ENST00000565486 219 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 MTND6P33-201ENST00000571794 183 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 AC123912.3-201ENST00000600907 1367 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 AC100847.1-201ENST00000611316 481 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 MIR6780A-201ENST00000615089 68 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 AC009704.2-201ENST00000618739 483 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 CASC19-255ENST00000641733 1385 ntBASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RSPO3Q9BXY4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AC108467.2-201ENST00000617640 1597 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AC008033.1-201ENST00000216407 1162 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 RNU1-94P-201ENST00000362627 173 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 RNU6-1320P-201ENST00000390838 107 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 RNU6-1269P-201ENST00000391139 107 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 RPL23AP59-201ENST00000399415 461 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AC097374.1-203ENST00000400783 485 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 Z98745.1-201ENST00000402553 494 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 RNU6-599P-201ENST00000459383 107 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 RNU6-1193P-201ENST00000459461 107 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AC012158.1-204ENST00000483430 465 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 STMN1P2-201ENST00000508435 439 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AC015795.1-201ENST00000513669 327 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 RNA5SP360-201ENST00000516555 118 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AC134698.5-201ENST00000519444 336 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AC018442.3-201ENST00000523025 183 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AC115286.1-201ENST00000604298 434 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AL133406.3-201ENST00000606817 541 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AC016252.1-201ENST00000609721 474 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AL161616.1-201ENST00000611867 286 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 RNU6-368P-201ENST00000620928 107 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 RNU6-538P-201ENST00000622329 107 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AC079298.2-201ENST00000623885 459 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AL596275.2-204ENST00000641628 552 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AL596275.2-206ENST00000641957 626 ntBASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RSPO3Q9BXY4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RSPO3Q9BXY4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.06□□□□□ -1.76
RSPO3Q9BXY4 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.06□□□□□ -1.76
RSPO3Q9BXY4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms