Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC116533.1-201ENST00000459748 321 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 RPL7P19-201ENST00000469948 618 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 PPM1AP1-201ENST00000502740 1135 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.06□□□□□ -1.44
USP47Q96K76 AC010374.1-201ENST00000503762 1237 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.06□□□□□ -1.44
USP47Q96K76 AC108475.1-201ENST00000507880 950 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.06□□□□□ -1.44
USP47Q96K76 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USP47Q96K76 AP001804.2-201ENST00000533932 910 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 AC025175.1-201ENST00000606482 759 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
USP47Q96K76 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.06□□□□□ -1.44
USP47Q96K76 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP47Q96K76 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP47Q96K76 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USP47Q96K76 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC6.06□□□□□ -1.44
USP47Q96K76 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
USP47Q96K76 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USP47Q96K76 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
USP47Q96K76 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP47Q96K76 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
USP47Q96K76 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.06□□□□□ -1.44
USP47Q96K76 RNA5SP366-201ENST00000365454 123 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 AL161909.1-201ENST00000397390 712 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.06□□□□□ -1.44
USP47Q96K76 CEACAMP8-201ENST00000413902 580 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 BMS1P19-201ENST00000433925 393 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 EEF1A1P1-201ENST00000447052 739 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.06□□□□□ -1.44
USP47Q96K76 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.06□□□□□ -1.44
USP47Q96K76 RPL7P22-201ENST00000466005 733 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
USP47Q96K76 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USP47Q96K76 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 SNORA31.9-201ENST00000516429 84 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 RNA5SP519-201ENST00000516480 119 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC6.06□□□□□ -1.44
USP47Q96K76 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USP47Q96K76 PSMB7P1-201ENST00000556349 514 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 AC008759.1-201ENST00000589783 983 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.06□□□□□ -1.44
USP47Q96K76 OR51C1P-201ENST00000608504 942 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 AC008785.1-201ENST00000624475 456 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USP47Q96K76 CASC19-255ENST00000641733 1385 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USP47Q96K76 MFSD8-242ENST00000641690 4199 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USP47Q96K76 MAPK10-303ENST00000641324 3959 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
USP47Q96K76 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.05□□□□□ -1.44
USP47Q96K76 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USP47Q96K76 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USP47Q96K76 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
USP47Q96K76 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
USP47Q96K76 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC6.05□□□□□ -1.44
USP47Q96K76 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USP47Q96K76 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC6.05□□□□□ -1.44
USP47Q96K76 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC6.05□□□□□ -1.44
USP47Q96K76 AL121657.1-201ENST00000327215 531 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 RNU1-14P-201ENST00000362759 152 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USP47Q96K76 AMZ2P2-201ENST00000406819 1057 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 RN7SKP235-201ENST00000410662 305 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 RPL23AP26-201ENST00000412728 464 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.05□□□□□ -1.44
USP47Q96K76 BTF3P10-201ENST00000433415 495 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.05□□□□□ -1.44
USP47Q96K76 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.05□□□□□ -1.44
USP47Q96K76 FPGT-203ENST00000467578 601 ntTSL 2 BASIC6.05□□□□□ -1.44
USP47Q96K76 AC091167.1-201ENST00000492017 396 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 AC108145.1-201ENST00000503770 153 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 AL592156.1-201ENST00000508758 304 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.05□□□□□ -1.44
USP47Q96K76 RNA5SP49-201ENST00000516450 115 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.05□□□□□ -1.44
USP47Q96K76 AC100770.1-201ENST00000532310 322 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.05□□□□□ -1.44
USP47Q96K76 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.05□□□□□ -1.44
USP47Q96K76 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.05□□□□□ -1.44
USP47Q96K76 CCDC58P3-201ENST00000590792 430 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.05□□□□□ -1.44
USP47Q96K76 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.05□□□□□ -1.44
USP47Q96K76 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC6.04□□□□□ -1.44
USP47Q96K76 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USP47Q96K76 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
USP47Q96K76 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USP47Q96K76 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USP47Q96K76 MTND5P12-201ENST00000502851 1449 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USP47Q96K76 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC6.04□□□□□ -1.44
USP47Q96K76 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
USP47Q96K76 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
USP47Q96K76 RNA5SP175-201ENST00000364275 119 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 AL359837.1-201ENST00000381357 287 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 SNORD66.1-201ENST00000391230 76 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 RPS26P8-201ENST00000393490 348 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.04□□□□□ -1.44
USP47Q96K76 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms