Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 MIR8084-201ENST00000614105 89 ntBASIC4.39□□□□□ -1.71
RFT1Q96AA3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.39□□□□□ -1.71
RFT1Q96AA3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.39□□□□□ -1.71
RFT1Q96AA3 AC007204.2-201ENST00000615022 616 ntBASIC4.39□□□□□ -1.71
RFT1Q96AA3 AC009237.17-201ENST00000618111 748 ntBASIC4.39□□□□□ -1.71
RFT1Q96AA3 AC095038.2-201ENST00000621464 1070 ntBASIC4.39□□□□□ -1.71
RFT1Q96AA3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RFT1Q96AA3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFT1Q96AA3 AC235565.1-201ENST00000456962 1325 ntBASIC4.39□□□□□ -1.71
RFT1Q96AA3 AC108751.5-201ENST00000492880 1336 ntBASIC4.39□□□□□ -1.71
RFT1Q96AA3 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.39□□□□□ -1.71
RFT1Q96AA3 AC008432.1-201ENST00000615912 1320 ntBASIC4.39□□□□□ -1.71
RFT1Q96AA3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFT1Q96AA3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.39□□□□□ -1.71
RFT1Q96AA3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.39□□□□□ -1.71
RFT1Q96AA3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.39□□□□□ -1.71
RFT1Q96AA3 AL359922.3-201ENST00000624779 1670 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFT1Q96AA3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFT1Q96AA3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFT1Q96AA3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 MIR600-201ENST00000385007 98 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AL513325.1-201ENST00000417716 1034 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 SLC35E1P1-201ENST00000419313 864 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC023128.2-201ENST00000420880 1223 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC005189.1-201ENST00000431286 310 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 CBX1P4-201ENST00000439415 457 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFT1Q96AA3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC133473.1-201ENST00000455173 299 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC005008.1-201ENST00000456151 612 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 EIF2S2P5-201ENST00000457635 968 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 DEFB109F-201ENST00000491870 277 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 GTF2F2P1-201ENST00000511083 675 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC090819.1-201ENST00000523800 1111 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC113192.3-201ENST00000529152 742 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFT1Q96AA3 GSTP1P1-201ENST00000548078 319 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 MIR3614-201ENST00000581261 86 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC098483.2-201ENST00000603158 454 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC234782.5-201ENST00000617723 324 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC136428.4-201ENST00000634254 1155 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC135068.12-201ENST00000637370 931 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFT1Q96AA3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFT1Q96AA3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFT1Q96AA3 AC017007.4-201ENST00000503353 1352 ntBASIC4.38□□□□□ -1.71
RFT1Q96AA3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFT1Q96AA3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFT1Q96AA3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.38□□□□□ -1.71
RFT1Q96AA3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RFT1Q96AA3 RNU1-94P-201ENST00000362627 173 ntBASIC4.37□□□□□ -1.71
RFT1Q96AA3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.37□□□□□ -1.71
RFT1Q96AA3 SNORA2.3-201ENST00000383920 135 ntBASIC4.37□□□□□ -1.71
RFT1Q96AA3 RNU6-317P-201ENST00000384031 107 ntBASIC4.37□□□□□ -1.71
RFT1Q96AA3 SNORA67-201ENST00000384423 137 ntBASIC4.37□□□□□ -1.71
RFT1Q96AA3 RNU6-1005P-201ENST00000384519 107 ntBASIC4.37□□□□□ -1.71
RFT1Q96AA3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RFT1Q96AA3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RFT1Q96AA3 AC009804.1-201ENST00000400949 179 ntBASIC4.37□□□□□ -1.71
RFT1Q96AA3 RNA5SP178-201ENST00000410380 128 ntBASIC4.37□□□□□ -1.71
RFT1Q96AA3 VTA1P1-201ENST00000414044 866 ntBASIC4.37□□□□□ -1.71
RFT1Q96AA3 AC009237.10-201ENST00000414112 510 ntBASIC4.37□□□□□ -1.71
RFT1Q96AA3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.37□□□□□ -1.71
RFT1Q96AA3 EIF4HP2-201ENST00000424380 563 ntBASIC4.37□□□□□ -1.71
RFT1Q96AA3 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms