Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.81□□□□□ -1.48
HPS3Q969F9 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.81□□□□□ -1.48
HPS3Q969F9 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HPS3Q969F9 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
HPS3Q969F9 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HPS3Q969F9 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.81□□□□□ -1.48
HPS3Q969F9 AC004817.4-201ENST00000602396 3625 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 RN7SKP162-201ENST00000363605 345 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 RNU4-92P-201ENST00000363783 136 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HPS3Q969F9 AL391361.1-201ENST00000405580 489 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 MIR1303-201ENST00000408625 86 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 Z75741.2-201ENST00000417272 1167 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 KRR1P1-201ENST00000419430 803 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.81□□□□□ -1.48
HPS3Q969F9 BX510359.3-201ENST00000422168 306 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.81□□□□□ -1.48
HPS3Q969F9 OR5M12P-201ENST00000423388 929 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 EI24P4-201ENST00000423683 1078 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 AC010099.3-201ENST00000423896 409 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.81□□□□□ -1.48
HPS3Q969F9 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.81□□□□□ -1.48
HPS3Q969F9 C1DP1-201ENST00000426049 402 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 OR5AW1P-201ENST00000426334 1006 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.81□□□□□ -1.48
HPS3Q969F9 FAM96AP1-201ENST00000430879 482 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HPS3Q969F9 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.81□□□□□ -1.48
HPS3Q969F9 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.81□□□□□ -1.48
HPS3Q969F9 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.81□□□□□ -1.48
HPS3Q969F9 AC009263.1-201ENST00000441193 1239 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.81□□□□□ -1.48
HPS3Q969F9 AC112492.1-201ENST00000449607 712 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.81□□□□□ -1.48
HPS3Q969F9 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.81□□□□□ -1.48
HPS3Q969F9 DNAJC19P8-201ENST00000452887 259 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.81□□□□□ -1.48
HPS3Q969F9 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.81□□□□□ -1.48
HPS3Q969F9 AL133445.1-201ENST00000467051 452 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.81□□□□□ -1.48
HPS3Q969F9 RPL7P6-201ENST00000480903 738 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 RPL23AP44-201ENST00000482216 473 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 NIFKP7-201ENST00000503365 834 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 MTCYBP35-201ENST00000503630 1137 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.81□□□□□ -1.48
HPS3Q969F9 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.81□□□□□ -1.48
HPS3Q969F9 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.81□□□□□ -1.48
HPS3Q969F9 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HPS3Q969F9 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.81□□□□□ -1.48
HPS3Q969F9 AC016180.1-201ENST00000567945 403 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 AC019322.1-201ENST00000571869 389 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 MTCO1P40-201ENST00000574371 625 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 AC008536.1-201ENST00000602872 669 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 AC021749.1-201ENST00000604322 607 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 AL583856.2-201ENST00000606298 543 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.81□□□□□ -1.48
HPS3Q969F9 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.81□□□□□ -1.48
HPS3Q969F9 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.81□□□□□ -1.48
HPS3Q969F9 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.81□□□□□ -1.48
HPS3Q969F9 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.81□□□□□ -1.48
HPS3Q969F9 MTND2P41-201ENST00000637599 773 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HPS3Q969F9 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.81□□□□□ -1.48
HPS3Q969F9 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HPS3Q969F9 ADAM5-202ENST00000399789 1942 ntBASIC5.81□□□□□ -1.48
HPS3Q969F9 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.81□□□□□ -1.48
HPS3Q969F9 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HPS3Q969F9 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HPS3Q969F9 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
HPS3Q969F9 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HPS3Q969F9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HPS3Q969F9 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HPS3Q969F9 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HPS3Q969F9 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HPS3Q969F9 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
HPS3Q969F9 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.8□□□□□ -1.48
HPS3Q969F9 AC023421.1-201ENST00000590535 1785 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 AC235565.1-201ENST00000456962 1325 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
HPS3Q969F9 RNA5SP183-201ENST00000362452 119 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HPS3Q969F9 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.8□□□□□ -1.48
HPS3Q969F9 HIGD1AP4-201ENST00000430194 280 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 AC234064.1-201ENST00000436312 247 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.8□□□□□ -1.48
HPS3Q969F9 AL163193.1-201ENST00000444895 788 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 AC004022.1-201ENST00000447766 1066 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 AC022431.1-201ENST00000450941 438 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 OR52E3P-201ENST00000452083 936 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 RPL23AP12-201ENST00000467573 473 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 RPS26P39-201ENST00000469206 341 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 RN7SL447P-201ENST00000494711 245 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.8□□□□□ -1.48
HPS3Q969F9 AC016559.2-201ENST00000510759 359 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 EIF3KP3-201ENST00000514461 639 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.8□□□□□ -1.48
HPS3Q969F9 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.8□□□□□ -1.48
HPS3Q969F9 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.8□□□□□ -1.48
HPS3Q969F9 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.8□□□□□ -1.48
HPS3Q969F9 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms