Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 RNU6-796P-201ENST00000391086 107 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AC104297.1-201ENST00000393779 870 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 SPTLC1P2-201ENST00000407089 121 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 RNU4-34P-201ENST00000410431 124 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 RNA5SP345-201ENST00000410646 108 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AC013262.1-201ENST00000426710 252 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 OR52B5P-201ENST00000435337 951 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AL645638.1-201ENST00000440519 361 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 RPS27P5-201ENST00000444247 244 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 HMGB1P5-202ENST00000451497 985 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 RN7SL97P-201ENST00000486780 299 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AC072052.1-201ENST00000496556 306 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 RN7SL558P-201ENST00000497468 299 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 COX6B1P5-201ENST00000509843 249 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 OR10G5P-201ENST00000532733 358 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 OR7E128P-201ENST00000532736 1024 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AC106734.1-201ENST00000568646 663 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 TVP23CP2-201ENST00000571473 623 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 SNORA74C-1-201ENST00000580726 201 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AL021707.7-201ENST00000607991 416 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AC211433.2-201ENST00000608433 387 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AC090912.3-201ENST00000609775 533 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 AC091046.2-201ENST00000620775 665 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 OR52B5P-202ENST00000641118 1110 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
SLC44A1Q8WWI5 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 RLIMP2-201ENST00000427891 1563 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 RNU6-354P-201ENST00000383862 107 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 RNU6-610P-201ENST00000384264 107 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 MIR105-2-201ENST00000385083 81 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 MIR223-201ENST00000385204 110 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 SNORD96B-201ENST00000386148 79 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 ARL4AP5-201ENST00000404372 599 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 TBCAP2-201ENST00000416175 326 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC245047.2-201ENST00000441060 530 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AL645937.3-201ENST00000453647 936 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 RN7SL172P-201ENST00000460535 303 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 RPL23AP37-201ENST00000479658 549 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 RN7SL727P-201ENST00000482164 296 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 HMGN2P25-201ENST00000486956 268 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC006499.3-201ENST00000506077 748 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC133963.2-201ENST00000513686 578 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 HMGB1P19-201ENST00000517578 577 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms