Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 OR8G2P-201ENST00000412796 908 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 CASKP1-201ENST00000412870 582 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AL117339.2-201ENST00000430475 180 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 CYCSP24-201ENST00000445119 316 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC016550.3-201ENST00000515706 767 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 MRPL49P2-201ENST00000521066 465 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 OR4K17-201ENST00000315543 1032 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 FTH1P16-201ENST00000435241 552 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 OR7E125P-201ENST00000443450 846 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 UQCRHP4-201ENST00000471686 272 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 SNORA9-201ENST00000384215 133 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 RPS27AP12-201ENST00000429552 465 ntBASIC1.38□□□□□ -2.19
SYNE1Q8NF91 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 NAT2-202ENST00000520116 716 ntTSL 3 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 CA1-225ENST00000626824 2405 ntTSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SYNE1Q8NF91 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AL672167.2-201ENST00000377164 879 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 OR1F12-201ENST00000402365 945 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AL603766.1-201ENST00000407763 664 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC091868.1-201ENST00000508746 304 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 RN7SL703P-201ENST00000578485 302 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 SOCS5P3-201ENST00000425115 1576 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 CTSL3P-202ENST00000412179 788 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC114814.2-201ENST00000419195 485 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 REREP1Y-201ENST00000422655 198 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AL157831.1-201ENST00000426134 473 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 MTCO1P54-201ENST00000430139 712 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 RPS17P8-201ENST00000434525 335 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC073143.1-201ENST00000436316 395 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 REREP2Y-201ENST00000439103 200 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC087190.4-201ENST00000574616 8334 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC114755.2-201ENST00000413520 361 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 SETP4-201ENST00000455717 868 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC021660.1-201ENST00000465006 554 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 NPM1P21-201ENST00000513394 762 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC119751.5-201ENST00000514077 770 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 ZNF415P1-201ENST00000582279 1166 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AF131215.7-201ENST00000602443 707 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC112484.5-201ENST00000624189 228 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 CDRT1-208ENST00000630868 794 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 VN2R3P-201ENST00000422626 1412 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 TCP1P3-201ENST00000414406 1498 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms