Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RPL5P23-201ENST00000496040 868 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 AC111000.3-201ENST00000508057 576 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 AC026782.2-201ENST00000510845 636 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 SNORA3.4-201ENST00000515969 96 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 MRPS36P3-201ENST00000519284 130 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 OR5AK3P-201ENST00000527486 1297 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 OSBPL9P5-201ENST00000542581 171 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 MTCYBP27-201ENST00000555160 670 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 MIR4277-201ENST00000578298 84 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 MIR4433B-201ENST00000581329 102 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 MIR132-201ENST00000591554 101 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 AC068790.7-201ENST00000602347 528 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 AL451064.1-201ENST00000607718 471 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 AC008785.1-201ENST00000624475 456 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 AC119674.1-212ENST00000641155 993 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 AC073055.1-201ENST00000456901 1621 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 UGT2B26P-201ENST00000508672 1613 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 AL138820.1-201ENST00000617901 5305 ntBASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SMC1BQ8NDV3 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AC104118.1-201ENST00000607625 1589 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 RNU4-92P-201ENST00000363783 136 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 MIR105-1-201ENST00000385222 81 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 RNU6-244P-201ENST00000391028 104 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 MTCO1P56-201ENST00000401674 224 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AC105402.1-201ENST00000413336 545 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AL731534.1-201ENST00000434711 269 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AC073143.1-201ENST00000436316 395 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AC112498.1-201ENST00000444401 332 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AL050341.1-201ENST00000447743 313 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 RN7SKP92-201ENST00000517266 244 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AC090424.1-201ENST00000535243 736 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AC007834.2-201ENST00000536310 343 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 H3F3BP2-201ENST00000583907 357 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AC004890.3-201ENST00000605566 1095 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AL138478.1-201ENST00000612252 832 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 OR1S1-201ENST00000624470 978 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AP003399.1-201ENST00000637534 361 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 MAPK10-263ENST00000641052 4307 ntBASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
SMC1BQ8NDV3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 METTL21EP-201ENST00000298105 713 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 GNG5P2-201ENST00000372054 207 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 Y_RNA.472-201ENST00000384322 102 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 RNU6-452P-201ENST00000384406 107 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms