Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AL132640.2-201ENST00000559968 1698 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC132825.1-201ENST00000463573 2247 ntBASIC5.5□□□□□ -1.53
SLC44A3Q8N4M1 AC092451.3-201ENST00000625067 1343 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AL353796.1-201ENST00000561542 3241 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AL121886.1-201ENST00000358609 435 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AL590139.1-201ENST00000416267 400 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC011753.3-201ENST00000443436 406 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 SEPT14P24-201ENST00000447236 180 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC092754.1-201ENST00000472975 479 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC079203.1-201ENST00000487972 404 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 RPF2P2-201ENST00000504693 896 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 MTCO2P32-201ENST00000514865 403 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 RN7SKP34-201ENST00000516142 244 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC134698.4-201ENST00000523451 826 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AL049830.4-201ENST00000555149 351 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC004987.4-201ENST00000603383 338 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC064872.1-201ENST00000604823 1072 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC105129.3-201ENST00000605455 485 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AP000255.1-201ENST00000610276 676 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 RNA5SP439-201ENST00000617595 124 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 ZNF849P-201ENST00000594711 1566 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC239868.2-201ENST00000564237 4527 ntBASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.49□□□□□ -1.53
SLC44A3Q8N4M1 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 ZNF542P-204ENST00000482727 1305 ntBASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 MCTS2P-201ENST00000394552 546 ntBASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 RPL11P3-201ENST00000395256 523 ntBASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 HMGB1P10-201ENST00000395823 563 ntBASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 RPS4XP9-201ENST00000405151 780 ntBASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 GLUD1P9-201ENST00000420997 1173 ntBASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 OR2AM1P-201ENST00000422137 422 ntBASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 KRT8P51-201ENST00000438938 274 ntBASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 AC092393.1-201ENST00000439625 742 ntBASIC5.48□□□□□ -1.53
SLC44A3Q8N4M1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms