Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RNU6-319P-201ENST00000516025 108 ntBASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 RNA5SP154-201ENST00000516193 111 ntBASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 IGLV2-28-201ENST00000520681 304 ntBASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 MIR3176-201ENST00000582210 90 ntBASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 BPIFA4P-203ENST00000603168 689 ntBASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 AC090948.2-201ENST00000607363 564 ntBASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 AC091905.4-201ENST00000623432 202 ntBASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 BMS1P21-201ENST00000634565 365 ntBASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NUDCD3Q8IVD9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 AC108467.2-201ENST00000617640 1597 ntBASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 RNA5SP307-201ENST00000362863 116 ntBASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 RNU4-4P-201ENST00000364588 130 ntBASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 RN7SKP229-201ENST00000410465 302 ntBASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 AC069285.2-201ENST00000440210 275 ntBASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 FHP1-201ENST00000442741 703 ntBASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 OR52J1P-201ENST00000450596 932 ntBASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 AC010469.1-201ENST00000463864 576 ntBASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 BTF3P13-201ENST00000513224 490 ntBASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 AC069240.1-201ENST00000548774 375 ntBASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 AL590410.1-201ENST00000617925 333 ntBASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 AC007546.2-201ENST00000623996 360 ntBASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 U3.53-201ENST00000628922 216 ntBASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NUDCD3Q8IVD9 AC011266.1-201ENST00000624119 3569 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 KPNA2P2-201ENST00000419546 1489 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 HSPD1P11-201ENST00000508643 1702 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AC105074.1-201ENST00000623380 3095 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 RNU6-891P-201ENST00000384280 111 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 MIR513A2-201ENST00000385249 127 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 RNU2-50P-201ENST00000410494 143 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 RSU1P3-201ENST00000412878 835 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 GTF3AP1-201ENST00000416942 1004 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AC007064.3-201ENST00000422608 359 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 MTND4LP13-201ENST00000425022 298 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 NRBF2P3-201ENST00000432731 865 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AL392003.1-201ENST00000434394 243 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 OR1H1P-201ENST00000448731 937 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 OR2AF1P-201ENST00000454899 889 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AC018638.3-201ENST00000461273 132 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AC079804.1-201ENST00000461922 436 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 RPL5P30-201ENST00000465511 891 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AC008147.3-201ENST00000548666 354 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 EIF1AXP2-201ENST00000555940 413 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AC105129.1-201ENST00000560250 297 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AC087763.1-201ENST00000603391 286 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AL160290.3-201ENST00000604869 165 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AC112694.2-201ENST00000623697 768 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 MAPK10-263ENST00000641052 4307 ntBASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.44□□□□□ -1.7
NUDCD3Q8IVD9 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms