Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF39Q86UA1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 RNF6P1-201ENST00000444889 1784 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 SNORA66-201ENST00000384792 133 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AL590290.1-201ENST00000405336 380 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 PTGES3P2-201ENST00000407942 482 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 MIR1271-201ENST00000408537 86 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 RPL12P28-201ENST00000430852 489 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AL049745.1-201ENST00000433953 286 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 RHOT1P3-201ENST00000436571 331 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AL450023.3-201ENST00000440592 271 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 TXNP5-201ENST00000441043 315 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 PTMAP3-201ENST00000447474 330 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 CYCSP42-201ENST00000450823 238 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AC140172.1-201ENST00000502928 141 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AC010350.1-201ENST00000504908 231 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 COX6B1P5-201ENST00000509843 249 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 RNA5SP303-201ENST00000516192 130 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 MTND2P7-201ENST00000521337 640 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AC005868.1-201ENST00000536421 331 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 NMNAT1P1-201ENST00000554095 876 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 NDUFB4P11-201ENST00000560510 395 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 MIR4691-201ENST00000583764 85 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 MIR6820-201ENST00000611508 62 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 TMEM30CP-203ENST00000637814 1035 ntBASIC5.12□□□□□ -1.59
PRPF39Q86UA1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PRPF39Q86UA1 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 MIR16-2-201ENST00000362117 81 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 RN7SKP149-201ENST00000363008 344 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 RNU6-792P-201ENST00000363490 107 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AL359643.1-201ENST00000404109 423 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AP002530.1-201ENST00000405705 684 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 RN7SKP216-201ENST00000411050 312 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 CHEK2P3-201ENST00000416118 248 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 RPL36AP10-201ENST00000421785 322 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 FABP7P2-201ENST00000429946 379 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 RPL12P46-201ENST00000436610 195 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 RPS29P9-201ENST00000440360 171 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC004980.3-201ENST00000447046 365 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 IGHV5-78-201ENST00000450948 295 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AL591473.1-201ENST00000464297 313 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC092324.1-201ENST00000468671 324 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC073073.1-201ENST00000493920 463 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 RPL23AP53-201ENST00000521854 457 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC012339.2-201ENST00000523996 453 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC008033.2-201ENST00000542626 177 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms