Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RFC5P1-201ENST00000454419 874 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AL133477.1-201ENST00000457472 514 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC068228.1-201ENST00000461723 211 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AL122020.1-201ENST00000472287 459 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 RN7SL591P-201ENST00000496150 292 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 RPS17P5-201ENST00000498293 408 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 LSM3P4-201ENST00000502948 309 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC092349.1-201ENST00000504903 310 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC016559.2-201ENST00000510759 359 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC098976.1-201ENST00000513014 541 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 PDCL2P2-201ENST00000533651 189 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AP000619.3-201ENST00000535634 1127 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 SERPINE4P-201ENST00000554978 281 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AL845552.1-201ENST00000556820 323 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC026826.3-201ENST00000561747 158 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AGGF1P6-201ENST00000569213 976 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC017100.2-201ENST00000584628 355 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC080013.3-201ENST00000606839 578 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC009163.6-201ENST00000612367 342 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC048344.4-201ENST00000619744 527 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC022079.1-201ENST00000621546 602 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 MIR6806-201ENST00000622141 64 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AC100778.3-201ENST00000580060 1750 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AP004607.3-201ENST00000530354 3915 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.33□□□□□ -1.56
RNF220Q5VTB9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RNF220Q5VTB9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AC104623.2-202ENST00000623477 4002 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AC092681.1-201ENST00000297369 291 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 COX6B1P3-201ENST00000312310 260 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AC006960.1-201ENST00000419980 153 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 RPS26P47-201ENST00000427219 348 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 VN1R110P-201ENST00000438988 971 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 ATP5LP2-201ENST00000440646 311 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 RAB11AP1-201ENST00000442978 646 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AL034418.1-201ENST00000448675 860 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 SNORD125-201ENST00000459538 96 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 RN7SL346P-201ENST00000491561 294 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AL117692.1-201ENST00000494283 713 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AC093534.1-201ENST00000504977 132 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AC116353.3-201ENST00000511215 249 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AC074255.1-201ENST00000511259 501 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 RN7SKP96-201ENST00000516948 297 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 WBP1LP3-201ENST00000523033 208 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AC137627.1-201ENST00000545761 289 ntBASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.32□□□□□ -1.56
RNF220Q5VTB9 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms