Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNA5SP249-201ENST00000516127 99 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AC243756.2-201ENST00000618406 463 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 NCOA4P2-201ENST00000340589 1813 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 MFSD8-236ENST00000641509 4050 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 EIF2S2P5-201ENST00000457635 968 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 SNRPCP3-201ENST00000474888 476 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 MIR6868-201ENST00000611215 58 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 LRRC37A9P-201ENST00000603850 5376 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 RPS17P13-201ENST00000448974 407 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 RN7SL132P-201ENST00000478131 296 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AL353726.1-201ENST00000614041 1000 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AC068870.3-201ENST00000625077 2536 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 FCF1P5-201ENST00000406490 482 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AL358472.1-201ENST00000431295 329 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AC092691.2-201ENST00000461787 803 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AC090013.1-201ENST00000485147 480 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 CYCSP40-201ENST00000575927 294 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AP002360.3-201ENST00000607673 710 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AL033543.1-201ENST00000623440 13454 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 NXPH1-205ENST00000602349 1953 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 MIR921-201ENST00000401133 56 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AL590704.1-201ENST00000402856 794 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 TRIM60P17-201ENST00000415181 719 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AC068533.1-201ENST00000418542 415 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 PPIAP3-201ENST00000450588 505 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 RPS11P1-201ENST00000451072 473 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 RNA5SP446-201ENST00000515955 82 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 OR9M1P-201ENST00000459641 921 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AL391261.4-201ENST00000616012 481 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 AC022106.2-201ENST00000620114 757 ntBASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 TTC3P1-201ENST00000399586 6081 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms