Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC023271.1-201ENST00000445936 1090 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 RN7SL323P-201ENST00000494712 295 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 AC097486.1-201ENST00000515331 210 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 DUX4L52-201ENST00000549363 777 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 RN7SL290P-201ENST00000578661 300 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LRRK2Q5S007 LINC01808-202ENST00000641680 1116 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 CPHL1P-201ENST00000461341 3407 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRK2Q5S007 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRK2Q5S007 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LRRK2Q5S007 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 AC233982.1-201ENST00000451247 436 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 PRELID3BP6-201ENST00000503839 571 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 IFITM8P-201ENST00000522529 394 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 GTF2IP8-201ENST00000560687 584 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRK2Q5S007 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRK2Q5S007 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 AP000357.1-201ENST00000409926 1165 ntBASIC3.81□□□□□ -1.8
LRRK2Q5S007 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRK2Q5S007 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRK2Q5S007 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRK2Q5S007 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRK2Q5S007 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRK2Q5S007 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRK2Q5S007 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRK2Q5S007 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 CASC19-261ENST00000641853 1638 ntBASIC3.81□□□□□ -1.8
LRRK2Q5S007 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 TBCAP1-201ENST00000436520 327 ntBASIC3.81□□□□□ -1.8
LRRK2Q5S007 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 PPIAP15-201ENST00000479662 484 ntBASIC3.81□□□□□ -1.8
LRRK2Q5S007 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 AC006065.6-201ENST00000625201 545 ntBASIC3.81□□□□□ -1.8
LRRK2Q5S007 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRK2Q5S007 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRK2Q5S007 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRK2Q5S007 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRK2Q5S007 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRK2Q5S007 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRK2Q5S007 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRK2Q5S007 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRK2Q5S007 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRK2Q5S007 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRK2Q5S007 AC092681.1-201ENST00000297369 291 ntBASIC3.8□□□□□ -1.8
LRRK2Q5S007 AL139095.1-201ENST00000404326 391 ntBASIC3.8□□□□□ -1.8
LRRK2Q5S007 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRK2Q5S007 ARAFP1-201ENST00000422172 605 ntBASIC3.8□□□□□ -1.8
LRRK2Q5S007 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRK2Q5S007 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRK2Q5S007 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRK2Q5S007 PYM1-205ENST00000547925 499 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRK2Q5S007 GTF2IP22-201ENST00000554443 182 ntBASIC3.8□□□□□ -1.8
LRRK2Q5S007 AP001267.4-201ENST00000602598 545 ntBASIC3.8□□□□□ -1.8
LRRK2Q5S007 AC020634.1-201ENST00000608701 549 ntBASIC3.8□□□□□ -1.8
LRRK2Q5S007 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRK2Q5S007 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRK2Q5S007 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRK2Q5S007 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
LRRK2Q5S007 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRK2Q5S007 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRK2Q5S007 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms