Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC009302.1-201ENST00000417147 390 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 PAICSP7-201ENST00000419829 962 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 CRIP1P1-201ENST00000427567 185 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC007559.1-201ENST00000428736 355 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC073143.1-201ENST00000436316 395 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 GAPDHP58-201ENST00000438477 1006 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC104978.1-201ENST00000449387 391 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC100832.1-201ENST00000471945 383 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 OR2AO1P-201ENST00000476497 403 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 RN7SL727P-201ENST00000482164 296 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 MTCYBP16-201ENST00000509187 1129 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC079171.1-201ENST00000568788 914 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC124856.1-201ENST00000600819 896 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AL390816.3-201ENST00000604527 1066 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC004948.1-201ENST00000609858 672 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC116447.1-201ENST00000613153 453 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC090246.1-201ENST00000616499 426 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC121761.2-201ENST00000617300 689 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 AC131159.1-201ENST00000621854 213 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 CASC19-264ENST00000641912 1184 ntBASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC144BQ3MJ40 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 PABPC1P6-201ENST00000445594 1829 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 SNORA70-201ENST00000384436 135 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 RNU6-1151P-201ENST00000384684 107 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 RNA5SP91-201ENST00000390902 119 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 RPL35AP24-201ENST00000413846 330 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AL133173.1-201ENST00000423458 397 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 RPL5P25-201ENST00000441148 775 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC004865.1-201ENST00000442276 1003 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC004129.2-201ENST00000457229 287 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC073358.1-201ENST00000505671 684 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC006499.3-201ENST00000506077 748 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 MIR2117-201ENST00000516780 80 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 HSPE1P2-201ENST00000554777 306 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC096996.1-201ENST00000563813 325 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC009220.3-201ENST00000604318 586 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC010200.2-201ENST00000605098 235 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AL121890.2-201ENST00000617644 465 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC015804.1-201ENST00000622935 435 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 AP001029.2-203ENST00000589795 4910 ntBASIC6.49□□□□□ -1.37
CCDC144BQ3MJ40 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms