Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC092653.1-201ENST00000608509 531 ntBASIC5.33□□□□□ -1.56
RFX7Q2KHR2 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 AC006971.1-201ENST00000407916 4486 ntBASIC5.33□□□□□ -1.56
RFX7Q2KHR2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
RFX7Q2KHR2 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 RNU1-13P-201ENST00000384499 162 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 AL583835.1-201ENST00000399570 407 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 SKP1P3-201ENST00000429280 487 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 PHBP16-201ENST00000446318 950 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 RPL7P32-201ENST00000457119 744 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 RPS27AP17-201ENST00000463344 455 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 UQCRHP4-201ENST00000471686 272 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 AC012158.1-204ENST00000483430 465 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 RN7SL812P-201ENST00000493791 279 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 AC093824.1-201ENST00000508796 343 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 AP003730.1-201ENST00000524605 285 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 AC025884.1-201ENST00000556034 378 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 PSMB7P1-201ENST00000556349 514 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 AC011477.5-201ENST00000586571 259 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 AC113403.1-201ENST00000604910 193 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 AL023881.1-201ENST00000621088 301 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.32□□□□□ -1.56
RFX7Q2KHR2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFX7Q2KHR2 SNORA70C-201ENST00000384538 135 ntBASIC5.31□□□□□ -1.56
RFX7Q2KHR2 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFX7Q2KHR2 RPS27AP12-201ENST00000429552 465 ntBASIC5.31□□□□□ -1.56
RFX7Q2KHR2 RPL23AP52-201ENST00000439311 478 ntBASIC5.31□□□□□ -1.56
RFX7Q2KHR2 RPL7P33-201ENST00000444159 742 ntBASIC5.31□□□□□ -1.56
RFX7Q2KHR2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.31□□□□□ -1.56
RFX7Q2KHR2 GOLGA5P1-201ENST00000507317 980 ntBASIC5.31□□□□□ -1.56
RFX7Q2KHR2 AC021146.3-201ENST00000511911 260 ntBASIC5.31□□□□□ -1.56
RFX7Q2KHR2 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.31□□□□□ -1.56
RFX7Q2KHR2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.31□□□□□ -1.56
RFX7Q2KHR2 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.31□□□□□ -1.56
RFX7Q2KHR2 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.31□□□□□ -1.56
RFX7Q2KHR2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.31□□□□□ -1.56
RFX7Q2KHR2 MIR3653-201ENST00000625572 110 ntBASIC5.31□□□□□ -1.56
RFX7Q2KHR2 AC140479.6-201ENST00000633535 357 ntBASIC5.31□□□□□ -1.56
RFX7Q2KHR2 AL672167.1-203ENST00000641299 2975 ntBASIC5.31□□□□□ -1.56
RFX7Q2KHR2 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.31□□□□□ -1.56
RFX7Q2KHR2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.31□□□□□ -1.56
RFX7Q2KHR2 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.31□□□□□ -1.56
RFX7Q2KHR2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RFX7Q2KHR2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RFX7Q2KHR2 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.31□□□□□ -1.56
RFX7Q2KHR2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.31□□□□□ -1.56
RFX7Q2KHR2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 IL6STP1-201ENST00000346911 1020 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 RNU1-132P-201ENST00000364300 164 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 SNORA57.1-201ENST00000391227 145 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 RNA5SP317-201ENST00000410176 116 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 RNA5SP311-201ENST00000411290 116 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 AC011933.1-201ENST00000413334 321 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 PDSS1P1-201ENST00000422953 1114 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 AC011998.1-201ENST00000433403 117 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 KCTD10P1-201ENST00000434203 625 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 OR4C10P-201ENST00000434991 931 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 AC116533.1-201ENST00000459748 321 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 ARL4AP1-201ENST00000503220 705 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 AC108475.1-201ENST00000507880 950 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 RNA5SP315-201ENST00000516340 116 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 RNA5SP312-201ENST00000517068 116 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 AC008694.2-201ENST00000517591 306 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 AC084824.1-201ENST00000550917 1005 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 BNIP3P5-201ENST00000562290 498 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.3□□□□□ -1.56
RFX7Q2KHR2 AL591034.3-201ENST00000605511 685 ntBASIC5.3□□□□□ -1.56
RFX7Q2KHR2 AL161637.1-201ENST00000622380 412 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms