Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL592156.1-201ENST00000508758 304 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 BTF3P13-201ENST00000513224 490 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AP001804.2-201ENST00000533932 910 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC005000.1-201ENST00000536192 288 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 GCSHP4-201ENST00000538792 439 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC007424.1-203ENST00000554613 687 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 EDDM3DP-201ENST00000554692 434 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC091178.1-203ENST00000584586 279 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 MIR6862-1-201ENST00000613016 70 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 MIR6862-2-201ENST00000614755 70 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 CYP1D1P-201ENST00000416662 1433 ntBASIC3.51□□□□□ -1.85
HIST1H1AQ02539 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HIST1H1AQ02539 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 INTS6P1-201ENST00000504674 2530 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 AC092642.1-201ENST00000392417 425 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 Z98745.1-201ENST00000402553 494 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 RPL23AP27-201ENST00000415161 451 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 PSMD10P3-201ENST00000437000 448 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 H2AFZP5-201ENST00000446960 382 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 OR52J1P-201ENST00000450596 932 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 RPS5P7-201ENST00000456664 608 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 AC074386.1-201ENST00000476560 767 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 RPL7AP6-201ENST00000477943 801 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 AC139783.2-201ENST00000504847 1145 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 AC008694.2-201ENST00000517591 306 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 IGHV3-32-201ENST00000519182 355 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 RFPL1S-203ENST00000539579 330 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 AC209154.1-201ENST00000582156 337 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 AC112694.2-201ENST00000623697 768 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HIST1H1AQ02539 LINC02471-203ENST00000641941 4752 ntBASIC3.5□□□□□ -1.85
HIST1H1AQ02539 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 MIR513A2-201ENST00000385249 127 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 COX6B1P1-201ENST00000415962 213 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HIST1H1AQ02539 MTND4LP13-201ENST00000425022 298 ntBASIC3.49□□□□□ -1.85
HIST1H1AQ02539 RPL21P43-201ENST00000425440 472 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms