Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX6-1P78426 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX6-1P78426 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX6-1P78426 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX6-1P78426 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NKX6-1P78426 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX6-1P78426 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX6-1P78426 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX6-1P78426 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX6-1P78426 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX6-1P78426 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
NKX6-1P78426 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
NKX6-1P78426 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX6-1P78426 RNA5SP375-201ENST00000362975 119 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 RNU6-249P-201ENST00000363016 102 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 RNU6-115P-201ENST00000364310 107 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 GNG5P2-201ENST00000372054 207 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX6-1P78426 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX6-1P78426 HMGA1P8-201ENST00000414130 321 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.22□□□□□ -1.57
NKX6-1P78426 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX6-1P78426 AC007562.1-201ENST00000421819 517 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AC007394.1-201ENST00000421941 531 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX6-1P78426 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX6-1P78426 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 ELOCP10-201ENST00000440624 327 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AC118469.1-201ENST00000442943 488 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AC079922.1-201ENST00000443291 359 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AP000281.1-201ENST00000444036 316 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AC023274.2-201ENST00000445264 521 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX6-1P78426 RPL10P17-201ENST00000453852 316 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AC112187.1-201ENST00000455837 479 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX6-1P78426 RN7SL610P-201ENST00000463845 291 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AC104689.1-201ENST00000473356 768 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AC114728.1-201ENST00000488289 483 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX6-1P78426 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX6-1P78426 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX6-1P78426 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.22□□□□□ -1.57
NKX6-1P78426 RNU6-488P-201ENST00000515918 99 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 RN7SKP31-201ENST00000516354 278 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 RNU6-678P-201ENST00000516832 109 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 CYCSP22-201ENST00000517555 339 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX6-1P78426 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.22□□□□□ -1.57
NKX6-1P78426 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
NKX6-1P78426 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX6-1P78426 AC017100.2-201ENST00000584628 355 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AL589674.2-201ENST00000604304 337 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 ELOCP34-201ENST00000604436 327 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AC010738.1-201ENST00000604970 987 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX6-1P78426 OR2AS2P-201ENST00000606902 342 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AC072039.2-201ENST00000608883 439 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 MIR6809-201ENST00000612189 116 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AC011939.3-201ENST00000613686 466 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AL136981.2-201ENST00000617319 734 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AC092140.2-201ENST00000618027 521 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AL136228.1-201ENST00000622221 319 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 AF246928.1-201ENST00000623768 87 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.22□□□□□ -1.57
NKX6-1P78426 AC000095.2-202ENST00000637415 154 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX6-1P78426 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX6-1P78426 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
NKX6-1P78426 GNL2P1-201ENST00000451274 2190 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 LINC02019-201ENST00000608605 2060 ntBASIC5.22□□□□□ -1.57
NKX6-1P78426 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX6-1P78426 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX6-1P78426 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX6-1P78426 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NKX6-1P78426 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NKX6-1P78426 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX6-1P78426 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NKX6-1P78426 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NKX6-1P78426 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
NKX6-1P78426 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.21□□□□□ -1.57
NKX6-1P78426 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX6-1P78426 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX6-1P78426 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX6-1P78426 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX6-1P78426 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
NKX6-1P78426 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NKX6-1P78426 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NKX6-1P78426 RNU1-74P-201ENST00000384108 171 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 RNU2-50P-201ENST00000410494 143 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 RPS15AP38-201ENST00000413110 372 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 RPL35AP3-201ENST00000414680 288 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NKX6-1P78426 BOLA3P4-201ENST00000418151 400 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 QRSL1P2-201ENST00000418582 964 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 BX284632.2-201ENST00000421091 399 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NKX6-1P78426 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX6-1P78426 REREP1Y-201ENST00000422655 198 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms