Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.24□□□□□ -1.73
CX3CL1P78423 AL158211.1-201ENST00000566763 763 ntBASIC4.24□□□□□ -1.73
CX3CL1P78423 AC027455.1-201ENST00000574104 594 ntBASIC4.24□□□□□ -1.73
CX3CL1P78423 AC090312.2-201ENST00000582687 378 ntBASIC4.24□□□□□ -1.73
CX3CL1P78423 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.24□□□□□ -1.73
CX3CL1P78423 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.24□□□□□ -1.73
CX3CL1P78423 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.24□□□□□ -1.73
CX3CL1P78423 VN1R88P-201ENST00000596787 292 ntBASIC4.24□□□□□ -1.73
CX3CL1P78423 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.24□□□□□ -1.73
CX3CL1P78423 AC005252.1-201ENST00000604518 1063 ntBASIC4.24□□□□□ -1.73
CX3CL1P78423 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.24□□□□□ -1.73
CX3CL1P78423 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.24□□□□□ -1.73
CX3CL1P78423 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.24□□□□□ -1.73
CX3CL1P78423 AC079395.2-201ENST00000610982 737 ntBASIC4.24□□□□□ -1.73
CX3CL1P78423 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CX3CL1P78423 AC090506.2-201ENST00000624521 419 ntBASIC4.24□□□□□ -1.73
CX3CL1P78423 MIR4302-201ENST00000638058 60 ntBASIC4.24□□□□□ -1.73
CX3CL1P78423 OR2L1P-202ENST00000641567 1023 ntBASIC4.24□□□□□ -1.73
CX3CL1P78423 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
CX3CL1P78423 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CX3CL1P78423 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.24□□□□□ -1.73
CX3CL1P78423 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.24□□□□□ -1.73
CX3CL1P78423 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CX3CL1P78423 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CX3CL1P78423 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.24□□□□□ -1.73
CX3CL1P78423 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.24□□□□□ -1.73
CX3CL1P78423 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CX3CL1P78423 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CX3CL1P78423 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CX3CL1P78423 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CL1P78423 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CL1P78423 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CL1P78423 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CL1P78423 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CL1P78423 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CL1P78423 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CL1P78423 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CL1P78423 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CL1P78423 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CL1P78423 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
CX3CL1P78423 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CX3CL1P78423 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CX3CL1P78423 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CL1P78423 U3.25-201ENST00000391209 220 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 OR4K12P-201ENST00000406538 961 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CL1P78423 RN7SKP97-201ENST00000410966 333 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AL390774.1-201ENST00000411924 246 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 MTATP6P20-201ENST00000414147 562 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.23□□□□□ -1.73
CX3CL1P78423 AC027644.1-201ENST00000419595 298 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 OR6C64P-201ENST00000419708 825 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CL1P78423 NPM1P24-201ENST00000428039 894 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 FAM96AP1-201ENST00000430879 482 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.23□□□□□ -1.73
CX3CL1P78423 AC090018.1-201ENST00000434369 367 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AC234064.1-201ENST00000436312 247 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.23□□□□□ -1.73
CX3CL1P78423 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CL1P78423 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.23□□□□□ -1.73
CX3CL1P78423 TXNP5-201ENST00000441043 315 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.23□□□□□ -1.73
CX3CL1P78423 AL591363.1-201ENST00000450091 483 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AC002553.2-201ENST00000453217 340 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CL1P78423 OR2AF1P-201ENST00000454899 889 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CL1P78423 AC079168.1-201ENST00000458741 345 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 RNA5SP103-201ENST00000459503 118 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CL1P78423 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.23□□□□□ -1.73
CX3CL1P78423 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.23□□□□□ -1.73
CX3CL1P78423 SIAH1P1-201ENST00000479411 923 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AC073522.1-201ENST00000483312 377 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AC058823.1-201ENST00000485315 474 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
CX3CL1P78423 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CL1P78423 IGBP1P5-201ENST00000507524 1000 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AC106872.4-201ENST00000510050 523 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CL1P78423 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.23□□□□□ -1.73
CX3CL1P78423 AC008562.1-201ENST00000521763 330 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 COX6B1P6-201ENST00000522347 255 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AC027369.5-201ENST00000533838 755 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CL1P78423 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CL1P78423 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CL1P78423 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.23□□□□□ -1.73
CX3CL1P78423 NIFKP8-201ENST00000560500 874 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AC093591.2-201ENST00000565254 3843 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CX3CL1P78423 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.23□□□□□ -1.73
CX3CL1P78423 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CL1P78423 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
CX3CL1P78423 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CL1P78423 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.23□□□□□ -1.73
CX3CL1P78423 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.23□□□□□ -1.73
CX3CL1P78423 AC106052.1-201ENST00000608029 497 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms