Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A1P61619 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A1P61619 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SEC61A1P61619 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A1P61619 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A1P61619 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A1P61619 RNU6-171P-201ENST00000384354 107 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 SNORD116-8-201ENST00000384365 95 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.61□□□□□ -1.67
SEC61A1P61619 AC007738.1-201ENST00000413892 348 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A1P61619 RPS3AP37-201ENST00000419176 745 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A1P61619 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.61□□□□□ -1.67
SEC61A1P61619 OR2AH1P-201ENST00000425717 928 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 UBE2V1P1-201ENST00000430836 445 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 AL035458.1-201ENST00000433096 585 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A1P61619 CYCSP12-201ENST00000437729 300 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 NPM1P33-201ENST00000438918 872 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.61□□□□□ -1.67
SEC61A1P61619 SPRYD7P1-201ENST00000443861 570 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A1P61619 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A1P61619 AC011225.1-201ENST00000457751 369 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 AC005410.1-202ENST00000460347 485 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.61□□□□□ -1.67
SEC61A1P61619 RN7SL583P-201ENST00000475692 287 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A1P61619 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A1P61619 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A1P61619 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.61□□□□□ -1.67
SEC61A1P61619 BX510359.5-201ENST00000515651 304 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 Y_RNA.688-201ENST00000516565 95 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A1P61619 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A1P61619 NDUFS5P6-201ENST00000529136 295 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 OR8I1P-201ENST00000529291 931 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A1P61619 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SEC61A1P61619 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A1P61619 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A1P61619 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.61□□□□□ -1.67
SEC61A1P61619 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.61□□□□□ -1.67
SEC61A1P61619 RBM22P1-201ENST00000578589 1214 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A1P61619 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A1P61619 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A1P61619 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A1P61619 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A1P61619 MTND3P19-201ENST00000603825 345 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 IMMP1LP3-201ENST00000604197 224 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.61□□□□□ -1.67
SEC61A1P61619 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.61□□□□□ -1.67
SEC61A1P61619 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.61□□□□□ -1.67
SEC61A1P61619 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.61□□□□□ -1.67
SEC61A1P61619 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A1P61619 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A1P61619 AC120338.1-201ENST00000625074 1541 ntBASIC4.61□□□□□ -1.67
SEC61A1P61619 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SEC61A1P61619 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.6□□□□□ -1.67
SEC61A1P61619 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SEC61A1P61619 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.6□□□□□ -1.67
SEC61A1P61619 AC083843.3-201ENST00000623679 2186 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SEC61A1P61619 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 SNORA16A-201ENST00000384342 137 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 Y_RNA.578-201ENST00000390903 88 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 AC233289.1-201ENST00000403700 508 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 HMGB1P13-201ENST00000406019 642 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A1P61619 Z93019.1-201ENST00000416450 973 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 MTND4P3-201ENST00000417829 541 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 LINC01347-201ENST00000417964 355 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 MTND2P18-201ENST00000419962 1030 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 DPY19L1P2-201ENST00000426647 915 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.6□□□□□ -1.67
SEC61A1P61619 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A1P61619 CYCSP6-201ENST00000434498 302 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 HMGB3P10-201ENST00000434734 572 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 MTND4P32-201ENST00000437189 1237 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SEC61A1P61619 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A1P61619 AC068135.1-201ENST00000446164 246 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A1P61619 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.6□□□□□ -1.67
SEC61A1P61619 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A1P61619 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.6□□□□□ -1.67
SEC61A1P61619 RPS4XP1-201ENST00000482189 787 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A1P61619 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.6□□□□□ -1.67
SEC61A1P61619 AC026414.1-201ENST00000504046 698 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms