Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLRN1P58418 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLRN1P58418 RPL23AP47-201ENST00000408017 460 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 RNA5SP431-201ENST00000410312 120 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 RN7SKP17-201ENST00000411242 351 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AC245060.4-201ENST00000413293 1121 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 CDK8P2-201ENST00000415020 547 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AL596448.1-201ENST00000415024 392 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.2□□□□□ -1.58
CLRN1P58418 NPM1P22-201ENST00000427761 952 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AC007679.3-201ENST00000434035 414 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.2□□□□□ -1.58
CLRN1P58418 MTND1P4-201ENST00000435196 415 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.2□□□□□ -1.58
CLRN1P58418 RPS12P17-201ENST00000438591 377 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 KRT8P51-201ENST00000438938 274 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 TPTE2P6-202ENST00000445572 1007 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 RPL23AP35-201ENST00000451906 501 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 MEMO1P4-201ENST00000453590 386 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 RPL5P32-201ENST00000454085 879 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 GEMIN2P1-201ENST00000454246 752 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 MTCO3P11-201ENST00000455103 774 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 SNRPGP9-201ENST00000456025 225 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.2□□□□□ -1.58
CLRN1P58418 AC116337.2-201ENST00000477662 156 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AC011825.1-201ENST00000484967 388 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AC109927.2-201ENST00000506416 303 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AC048346.1-201ENST00000510247 144 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.2□□□□□ -1.58
CLRN1P58418 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.2□□□□□ -1.58
CLRN1P58418 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.2□□□□□ -1.58
CLRN1P58418 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.2□□□□□ -1.58
CLRN1P58418 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.2□□□□□ -1.58
CLRN1P58418 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.2□□□□□ -1.58
CLRN1P58418 OR5AK1P-201ENST00000524837 922 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AL139174.1-201ENST00000531489 886 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.2□□□□□ -1.58
CLRN1P58418 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.2□□□□□ -1.58
CLRN1P58418 AC006512.2-201ENST00000543250 486 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.2□□□□□ -1.58
CLRN1P58418 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLRN1P58418 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.2□□□□□ -1.58
CLRN1P58418 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.2□□□□□ -1.58
CLRN1P58418 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.2□□□□□ -1.58
CLRN1P58418 MIR4801-201ENST00000582704 82 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AC087683.1-201ENST00000591187 441 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLRN1P58418 AC087752.4-201ENST00000605911 462 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AC009779.8-202ENST00000607990 932 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AP004247.3-201ENST00000608682 624 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AC108673.3-201ENST00000609183 335 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AC092794.1-201ENST00000612734 582 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AC018926.3-201ENST00000618841 406 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.2□□□□□ -1.58
CLRN1P58418 ATE1-AS1-202ENST00000636460 506 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLRN1P58418 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.2□□□□□ -1.58
CLRN1P58418 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLRN1P58418 OR11H2-202ENST00000641517 1085 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.2□□□□□ -1.58
CLRN1P58418 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.2□□□□□ -1.58
CLRN1P58418 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLRN1P58418 AC005832.2-201ENST00000538921 1430 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLRN1P58418 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLRN1P58418 DDX18P4-201ENST00000511690 1966 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLRN1P58418 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.2□□□□□ -1.58
CLRN1P58418 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.2□□□□□ -1.58
CLRN1P58418 AL603750.1-201ENST00000624216 1717 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLRN1P58418 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.2□□□□□ -1.58
CLRN1P58418 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.2□□□□□ -1.58
CLRN1P58418 AC046144.1-201ENST00000478559 1853 ntBASIC5.2□□□□□ -1.58
CLRN1P58418 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CLRN1P58418 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLRN1P58418 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLRN1P58418 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLRN1P58418 AC027088.4-201ENST00000611559 1947 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.19□□□□□ -1.58
CLRN1P58418 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLRN1P58418 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.19□□□□□ -1.58
CLRN1P58418 USP9YP33-201ENST00000412220 421 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.19□□□□□ -1.58
CLRN1P58418 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.19□□□□□ -1.58
CLRN1P58418 CYCSP46-201ENST00000423569 204 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 MGAT2P2-201ENST00000427194 797 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AC007559.1-201ENST00000428736 355 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 SKP1P3-201ENST00000429280 487 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 RPL7P4-203ENST00000430239 730 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AC126120.1-201ENST00000431082 470 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AC069154.1-201ENST00000432914 542 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.19□□□□□ -1.58
CLRN1P58418 USP9YP29-201ENST00000445112 563 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.19□□□□□ -1.58
CLRN1P58418 NPM1P49-201ENST00000448027 714 ntBASIC5.19□□□□□ -1.58
CLRN1P58418 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms