Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.66□□□□□ -1.5
GFRA1P56159 RNY3P14-201ENST00000384309 102 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 RNU6-297P-201ENST00000384636 107 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 MIR621-201ENST00000384919 96 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
GFRA1P56159 RPL17P50-201ENST00000396131 546 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
GFRA1P56159 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA1P56159 AL390316.1-201ENST00000406279 553 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 RNU6-248P-201ENST00000410720 107 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.66□□□□□ -1.5
GFRA1P56159 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.66□□□□□ -1.5
GFRA1P56159 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.66□□□□□ -1.5
GFRA1P56159 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.66□□□□□ -1.5
GFRA1P56159 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.66□□□□□ -1.5
GFRA1P56159 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA1P56159 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.66□□□□□ -1.5
GFRA1P56159 AC073909.1-201ENST00000447112 999 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.66□□□□□ -1.5
GFRA1P56159 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.66□□□□□ -1.5
GFRA1P56159 HIGD1AP16-201ENST00000450986 258 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 AC003071.1-201ENST00000451219 789 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 AC074386.1-201ENST00000476560 767 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 RPL5P12-201ENST00000477071 851 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA1P56159 MTND6P8-201ENST00000503471 522 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 SNX18P24-201ENST00000505249 671 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
GFRA1P56159 PRDX4P1-201ENST00000507189 574 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.66□□□□□ -1.5
GFRA1P56159 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.66□□□□□ -1.5
GFRA1P56159 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.66□□□□□ -1.5
GFRA1P56159 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 IGHV1-14-201ENST00000523391 241 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 BCAS2P1-201ENST00000528022 632 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 AP004247.1-201ENST00000531556 1289 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA1P56159 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.66□□□□□ -1.5
GFRA1P56159 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA1P56159 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.66□□□□□ -1.5
GFRA1P56159 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.66□□□□□ -1.5
GFRA1P56159 AC068714.1-201ENST00000559623 800 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.66□□□□□ -1.5
GFRA1P56159 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.66□□□□□ -1.5
GFRA1P56159 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA1P56159 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.66□□□□□ -1.5
GFRA1P56159 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.66□□□□□ -1.5
GFRA1P56159 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA1P56159 DYNLL1P1-201ENST00000595442 269 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 AL355816.1-201ENST00000607951 118 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.66□□□□□ -1.5
GFRA1P56159 AC103710.1-201ENST00000610003 901 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 AC008250.2-201ENST00000615261 205 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 AL356321.1-201ENST00000621360 228 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 AC138649.3-201ENST00000622154 254 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.66□□□□□ -1.5
GFRA1P56159 AC140479.2-201ENST00000421567 3130 ntBASIC5.66□□□□□ -1.5
GFRA1P56159 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA1P56159 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA1P56159 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.66□□□□□ -1.5
GFRA1P56159 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.66□□□□□ -1.5
GFRA1P56159 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA1P56159 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA1P56159 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA1P56159 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA1P56159 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA1P56159 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
GFRA1P56159 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.66□□□□□ -1.5
GFRA1P56159 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA1P56159 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
GFRA1P56159 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.65□□□□□ -1.5
GFRA1P56159 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.65□□□□□ -1.5
GFRA1P56159 AL359976.1-201ENST00000418655 3528 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.65□□□□□ -1.5
GFRA1P56159 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.65□□□□□ -1.5
GFRA1P56159 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 AC005618.1-201ENST00000606901 3148 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.65□□□□□ -1.5
GFRA1P56159 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
GFRA1P56159 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.65□□□□□ -1.5
GFRA1P56159 GAPDHP24-201ENST00000328713 983 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 STAG3L4-201ENST00000352103 530 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 Y_RNA.88-201ENST00000363029 99 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.65□□□□□ -1.5
GFRA1P56159 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 SNORA11.5-201ENST00000408163 128 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 AL513325.1-201ENST00000417716 1034 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 AC008280.1-201ENST00000418851 412 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
GFRA1P56159 SDCBPP2-201ENST00000424643 885 ntBASIC5.65□□□□□ -1.5
GFRA1P56159 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms