Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH4P55283 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH4P55283 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH4P55283 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH4P55283 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH4P55283 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH4P55283 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH4P55283 AC009303.3-201ENST00000591103 736 ntBASIC4.68□□□□□ -1.66
CDH4P55283 RPL12P25-202ENST00000598100 674 ntBASIC4.68□□□□□ -1.66
CDH4P55283 AC007620.3-201ENST00000608131 497 ntBASIC4.68□□□□□ -1.66
CDH4P55283 AL590410.1-201ENST00000617925 333 ntBASIC4.68□□□□□ -1.66
CDH4P55283 RMST_5.1-201ENST00000618704 126 ntBASIC4.68□□□□□ -1.66
CDH4P55283 AP005019.3-201ENST00000620418 560 ntBASIC4.68□□□□□ -1.66
CDH4P55283 AC010435.1-201ENST00000623353 1177 ntBASIC4.68□□□□□ -1.66
CDH4P55283 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH4P55283 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH4P55283 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
CDH4P55283 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDH4P55283 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDH4P55283 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH4P55283 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH4P55283 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH4P55283 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH4P55283 DDX18P3-201ENST00000404856 2007 ntBASIC4.67□□□□□ -1.66
CDH4P55283 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH4P55283 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
CDH4P55283 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH4P55283 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH4P55283 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CDH4P55283 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH4P55283 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH4P55283 MIR659-201ENST00000384963 97 ntBASIC4.67□□□□□ -1.66
CDH4P55283 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH4P55283 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH4P55283 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH4P55283 RPS27AP7-201ENST00000422792 455 ntBASIC4.67□□□□□ -1.66
CDH4P55283 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH4P55283 AC068287.1-201ENST00000430283 295 ntBASIC4.67□□□□□ -1.66
CDH4P55283 RPL12P28-201ENST00000430852 489 ntBASIC4.67□□□□□ -1.66
CDH4P55283 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH4P55283 TPT1P13-201ENST00000449760 499 ntBASIC4.67□□□□□ -1.66
CDH4P55283 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH4P55283 AC138938.1-201ENST00000515431 782 ntBASIC4.67□□□□□ -1.66
CDH4P55283 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH4P55283 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH4P55283 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CDH4P55283 AC022882.1-201ENST00000532142 501 ntBASIC4.67□□□□□ -1.66
CDH4P55283 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH4P55283 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH4P55283 MIR4715-201ENST00000584117 79 ntBASIC4.67□□□□□ -1.66
CDH4P55283 ADAD1P2-201ENST00000588476 646 ntBASIC4.67□□□□□ -1.66
CDH4P55283 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH4P55283 AC023762.1-201ENST00000603280 584 ntBASIC4.67□□□□□ -1.66
CDH4P55283 AC008745.1-201ENST00000604064 271 ntBASIC4.67□□□□□ -1.66
CDH4P55283 AC133552.5-201ENST00000604266 540 ntBASIC4.67□□□□□ -1.66
CDH4P55283 AC115286.1-201ENST00000604298 434 ntBASIC4.67□□□□□ -1.66
CDH4P55283 AC019131.2-201ENST00000609071 870 ntBASIC4.67□□□□□ -1.66
CDH4P55283 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CDH4P55283 AC002044.3-201ENST00000623314 541 ntBASIC4.67□□□□□ -1.66
CDH4P55283 AP002967.1-201ENST00000624203 539 ntBASIC4.67□□□□□ -1.66
CDH4P55283 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH4P55283 LINC01808-202ENST00000641680 1116 ntBASIC4.67□□□□□ -1.66
CDH4P55283 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH4P55283 SALL4P2-201ENST00000423288 2910 ntBASIC4.67□□□□□ -1.66
CDH4P55283 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH4P55283 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH4P55283 MFSD8-242ENST00000641690 4199 ntBASIC4.67□□□□□ -1.66
CDH4P55283 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH4P55283 MAPK10-349ENST00000641767 3661 ntBASIC4.67□□□□□ -1.66
CDH4P55283 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CDH4P55283 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH4P55283 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH4P55283 CPHL1P-201ENST00000461341 3407 ntBASIC4.66□□□□□ -1.66
CDH4P55283 AL137100.1-201ENST00000556703 1620 ntBASIC4.66□□□□□ -1.66
CDH4P55283 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CDH4P55283 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH4P55283 MIR921-201ENST00000401133 56 ntBASIC4.66□□□□□ -1.66
CDH4P55283 AL512430.2-201ENST00000406786 339 ntBASIC4.66□□□□□ -1.66
CDH4P55283 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH4P55283 RAD23BP1-201ENST00000421404 1227 ntBASIC4.66□□□□□ -1.66
CDH4P55283 Z74021.1-201ENST00000423610 407 ntBASIC4.66□□□□□ -1.66
CDH4P55283 RPS12P10-201ENST00000427031 377 ntBASIC4.66□□□□□ -1.66
CDH4P55283 DNAJC19P7-201ENST00000428811 344 ntBASIC4.66□□□□□ -1.66
CDH4P55283 MTND6P18-201ENST00000439477 513 ntBASIC4.66□□□□□ -1.66
CDH4P55283 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH4P55283 AC243772.1-201ENST00000451620 410 ntBASIC4.66□□□□□ -1.66
CDH4P55283 MTND2P28-201ENST00000457540 1044 ntBASIC4.66□□□□□ -1.66
CDH4P55283 AC113430.1-201ENST00000506872 718 ntBASIC4.66□□□□□ -1.66
CDH4P55283 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH4P55283 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH4P55283 RN7SKP46-201ENST00000515942 234 ntBASIC4.66□□□□□ -1.66
CDH4P55283 AF186190.1-201ENST00000517470 480 ntBASIC4.66□□□□□ -1.66
CDH4P55283 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH4P55283 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH4P55283 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH4P55283 MIR5096-201ENST00000583713 70 ntBASIC4.66□□□□□ -1.66
CDH4P55283 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.66□□□□□ -1.66
CDH4P55283 HMGB2P1-201ENST00000591146 634 ntBASIC4.66□□□□□ -1.66
CDH4P55283 AC068790.4-201ENST00000602474 263 ntBASIC4.66□□□□□ -1.66
CDH4P55283 RNF138P2-201ENST00000603490 592 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms