Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NUP98P52948 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NUP98P52948 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.26□□□□□ -1.57
NUP98P52948 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.26□□□□□ -1.57
NUP98P52948 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUP98P52948 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
NUP98P52948 MAPK10-349ENST00000641767 3661 ntBASIC5.26□□□□□ -1.57
NUP98P52948 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUP98P52948 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUP98P52948 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.26□□□□□ -1.57
NUP98P52948 HSPE1P12-201ENST00000412576 301 ntBASIC5.26□□□□□ -1.57
NUP98P52948 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NUP98P52948 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.26□□□□□ -1.57
NUP98P52948 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.26□□□□□ -1.57
NUP98P52948 AC022034.3-201ENST00000471393 478 ntBASIC5.26□□□□□ -1.57
NUP98P52948 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUP98P52948 RNA5SP497-201ENST00000516081 97 ntBASIC5.26□□□□□ -1.57
NUP98P52948 AC007991.1-201ENST00000522680 631 ntBASIC5.26□□□□□ -1.57
NUP98P52948 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.26□□□□□ -1.57
NUP98P52948 AC022106.2-201ENST00000620114 757 ntBASIC5.26□□□□□ -1.57
NUP98P52948 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUP98P52948 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUP98P52948 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NUP98P52948 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
NUP98P52948 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NUP98P52948 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
NUP98P52948 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.26□□□□□ -1.57
NUP98P52948 VPS35P1-201ENST00000563400 1518 ntBASIC5.26□□□□□ -1.57
NUP98P52948 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.26□□□□□ -1.57
NUP98P52948 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
NUP98P52948 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
NUP98P52948 MIR554-201ENST00000384874 96 ntBASIC5.25□□□□□ -1.57
NUP98P52948 RNU11-4P-201ENST00000391149 133 ntBASIC5.25□□□□□ -1.57
NUP98P52948 AC006011.1-201ENST00000442758 349 ntBASIC5.25□□□□□ -1.57
NUP98P52948 RPL38P1-201ENST00000460914 211 ntBASIC5.25□□□□□ -1.57
NUP98P52948 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.25□□□□□ -1.57
NUP98P52948 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.25□□□□□ -1.57
NUP98P52948 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.25□□□□□ -1.57
NUP98P52948 CCNG2P1-201ENST00000549521 1000 ntBASIC5.25□□□□□ -1.57
NUP98P52948 MIR4444-1-201ENST00000581696 74 ntBASIC5.25□□□□□ -1.57
NUP98P52948 MIR4444-2-201ENST00000584390 74 ntBASIC5.25□□□□□ -1.57
NUP98P52948 AL356863.1-201ENST00000623378 1080 ntBASIC5.25□□□□□ -1.57
NUP98P52948 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.25□□□□□ -1.57
NUP98P52948 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP98P52948 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
NUP98P52948 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.25□□□□□ -1.57
NUP98P52948 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP98P52948 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUP98P52948 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP98P52948 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP98P52948 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
NUP98P52948 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP98P52948 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP98P52948 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
NUP98P52948 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NUP98P52948 RPL23AP65-201ENST00000475608 468 ntBASIC5.25□□□□□ -1.57
NUP98P52948 RPS29P19-201ENST00000479709 171 ntBASIC5.25□□□□□ -1.57
NUP98P52948 KRT19P6-201ENST00000510983 209 ntBASIC5.25□□□□□ -1.57
NUP98P52948 AC023632.4-201ENST00000517783 191 ntBASIC5.25□□□□□ -1.57
NUP98P52948 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP98P52948 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.25□□□□□ -1.57
NUP98P52948 MIR3158-1-201ENST00000583596 81 ntBASIC5.25□□□□□ -1.57
NUP98P52948 MIR6500-201ENST00000622700 86 ntBASIC5.25□□□□□ -1.57
NUP98P52948 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP98P52948 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NUP98P52948 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
NUP98P52948 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.24□□□□□ -1.57
NUP98P52948 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUP98P52948 RNA5SP22-201ENST00000365393 109 ntBASIC5.24□□□□□ -1.57
NUP98P52948 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NUP98P52948 RNA5SP44-201ENST00000410446 133 ntBASIC5.24□□□□□ -1.57
NUP98P52948 AL133547.1-201ENST00000448546 220 ntBASIC5.24□□□□□ -1.57
NUP98P52948 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.24□□□□□ -1.57
NUP98P52948 AC138832.1-201ENST00000522871 556 ntBASIC5.24□□□□□ -1.57
NUP98P52948 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.24□□□□□ -1.57
NUP98P52948 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
NUP98P52948 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUP98P52948 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUP98P52948 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUP98P52948 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUP98P52948 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NUP98P52948 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NUP98P52948 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.24□□□□□ -1.57
NUP98P52948 HSPD1P14-201ENST00000432666 1618 ntBASIC5.23□□□□□ -1.57
NUP98P52948 SNORD96B-201ENST00000386148 79 ntBASIC5.23□□□□□ -1.57
NUP98P52948 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.23□□□□□ -1.57
NUP98P52948 AC069157.1-201ENST00000421749 137 ntBASIC5.23□□□□□ -1.57
NUP98P52948 AL445584.1-201ENST00000431451 330 ntBASIC5.23□□□□□ -1.57
NUP98P52948 RPL23AP2-201ENST00000471227 466 ntBASIC5.23□□□□□ -1.57
NUP98P52948 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.23□□□□□ -1.57
NUP98P52948 RNU6-352P-201ENST00000516908 107 ntBASIC5.23□□□□□ -1.57
NUP98P52948 TRMT10BP1-201ENST00000519377 943 ntBASIC5.23□□□□□ -1.57
NUP98P52948 AC006064.5-201ENST00000541782 248 ntBASIC5.23□□□□□ -1.57
NUP98P52948 AC124068.1-201ENST00000563131 678 ntBASIC5.23□□□□□ -1.57
NUP98P52948 HNRNPCP4-201ENST00000571636 900 ntBASIC5.23□□□□□ -1.57
NUP98P52948 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUP98P52948 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NUP98P52948 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.23□□□□□ -1.57
NUP98P52948 AC015871.5-202ENST00000623252 701 ntBASIC5.23□□□□□ -1.57
NUP98P52948 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms