Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RN7SL481P-201ENST00000477764 299 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CLCN3P51790 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCN3P51790 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.23□□□□□ -1.57
CLCN3P51790 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.23□□□□□ -1.57
CLCN3P51790 UBTFL9-201ENST00000534504 1148 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.23□□□□□ -1.57
CLCN3P51790 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCN3P51790 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCN3P51790 AL049830.4-201ENST00000555149 351 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCN3P51790 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCN3P51790 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCN3P51790 AC127024.5-201ENST00000580085 462 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.23□□□□□ -1.57
CLCN3P51790 AC090330.1-201ENST00000588646 764 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 AC079880.2-201ENST00000603790 1213 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 AC073137.1-201ENST00000605636 634 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 AL135786.2-201ENST00000608422 615 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 AC138965.3-201ENST00000623875 498 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 AC010872.1-201ENST00000624225 675 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.23□□□□□ -1.57
CLCN3P51790 AC025574.1-201ENST00000554784 1653 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.23□□□□□ -1.57
CLCN3P51790 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CLCN3P51790 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CLCN3P51790 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.23□□□□□ -1.57
CLCN3P51790 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCN3P51790 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.23□□□□□ -1.57
CLCN3P51790 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.23□□□□□ -1.57
CLCN3P51790 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN3P51790 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN3P51790 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN3P51790 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CLCN3P51790 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.22□□□□□ -1.57
CLCN3P51790 OR4K15-201ENST00000305051 1216 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN3P51790 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN3P51790 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.22□□□□□ -1.57
CLCN3P51790 HMGB1P10-201ENST00000395823 563 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.22□□□□□ -1.57
CLCN3P51790 OR51B3P-201ENST00000412287 913 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 AL590806.1-201ENST00000415818 853 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.22□□□□□ -1.57
CLCN3P51790 AC140479.3-201ENST00000418944 1126 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.22□□□□□ -1.57
CLCN3P51790 AL606495.1-201ENST00000422100 813 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.22□□□□□ -1.57
CLCN3P51790 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.22□□□□□ -1.57
CLCN3P51790 AC016712.1-201ENST00000431088 378 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.22□□□□□ -1.57
CLCN3P51790 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.22□□□□□ -1.57
CLCN3P51790 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.22□□□□□ -1.57
CLCN3P51790 CLIC4P1-201ENST00000453177 535 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 snoU13.1-201ENST00000459157 104 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.22□□□□□ -1.57
CLCN3P51790 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.22□□□□□ -1.57
CLCN3P51790 AK3P4-201ENST00000504283 583 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.22□□□□□ -1.57
CLCN3P51790 RN7SKP157-201ENST00000516174 282 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.22□□□□□ -1.57
CLCN3P51790 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.22□□□□□ -1.57
CLCN3P51790 AL049870.4-201ENST00000555741 486 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.22□□□□□ -1.57
CLCN3P51790 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.22□□□□□ -1.57
CLCN3P51790 MIR5096-201ENST00000583713 70 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.22□□□□□ -1.57
CLCN3P51790 AC006116.7-201ENST00000590141 756 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 BNIP3P27-201ENST00000599991 412 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 RPAP2P1-201ENST00000603626 1168 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 OR7A19P-201ENST00000608051 733 ntBASIC5.22□□□□□ -1.57
CLCN3P51790 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLCN3P51790 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.22□□□□□ -1.57
CLCN3P51790 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN3P51790 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN3P51790 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN3P51790 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN3P51790 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.22□□□□□ -1.57
CLCN3P51790 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLCN3P51790 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.22□□□□□ -1.57
CLCN3P51790 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CLCN3P51790 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CLCN3P51790 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CLCN3P51790 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLCN3P51790 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCN3P51790 Z95331.1-201ENST00000623075 23112 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.21□□□□□ -1.58
CLCN3P51790 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCN3P51790 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLCN3P51790 SNORD113.2-201ENST00000364166 89 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 AL035405.1-201ENST00000400795 710 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 AL445213.1-201ENST00000412589 747 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCN3P51790 AC009480.2-201ENST00000422916 432 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 RGS17P1-201ENST00000423358 553 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 RPEP3-201ENST00000425462 676 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCN3P51790 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCN3P51790 RNFT1P2-201ENST00000443064 757 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms