Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC010132.2-201ENST00000295493 1043 ntBASIC6.27□□□□□ -1.41
MRE11P49959 RNU6-636P-201ENST00000384598 107 ntBASIC6.27□□□□□ -1.41
MRE11P49959 MIR223-201ENST00000385204 110 ntBASIC6.27□□□□□ -1.41
MRE11P49959 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.27□□□□□ -1.41
MRE11P49959 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.27□□□□□ -1.41
MRE11P49959 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.27□□□□□ -1.41
MRE11P49959 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.27□□□□□ -1.41
MRE11P49959 SEPT2P1-201ENST00000419651 180 ntBASIC6.27□□□□□ -1.41
MRE11P49959 PTP4A1P1-201ENST00000420539 515 ntBASIC6.27□□□□□ -1.41
MRE11P49959 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.27□□□□□ -1.41
MRE11P49959 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.27□□□□□ -1.41
MRE11P49959 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.27□□□□□ -1.41
MRE11P49959 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.27□□□□□ -1.41
MRE11P49959 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC6.27□□□□□ -1.41
MRE11P49959 RPS11P7-201ENST00000442125 465 ntBASIC6.27□□□□□ -1.41
MRE11P49959 RAB28P3-201ENST00000448325 597 ntBASIC6.27□□□□□ -1.41
MRE11P49959 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
MRE11P49959 AC008280.2-201ENST00000455473 307 ntBASIC6.27□□□□□ -1.41
MRE11P49959 ATG12P2-201ENST00000456830 416 ntBASIC6.27□□□□□ -1.41
MRE11P49959 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.27□□□□□ -1.41
MRE11P49959 RPL6P9-201ENST00000466502 859 ntBASIC6.27□□□□□ -1.41
MRE11P49959 RPSAP50-201ENST00000481955 852 ntBASIC6.27□□□□□ -1.41
MRE11P49959 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.27□□□□□ -1.41
MRE11P49959 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.27□□□□□ -1.41
MRE11P49959 RPL15P21-201ENST00000495592 567 ntBASIC6.27□□□□□ -1.41
MRE11P49959 AC026414.1-201ENST00000504046 698 ntBASIC6.27□□□□□ -1.41
MRE11P49959 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC6.27□□□□□ -1.41
MRE11P49959 SNORA70.20-201ENST00000516848 126 ntBASIC6.27□□□□□ -1.41
MRE11P49959 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.27□□□□□ -1.41
MRE11P49959 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.27□□□□□ -1.41
MRE11P49959 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.27□□□□□ -1.41
MRE11P49959 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.27□□□□□ -1.41
MRE11P49959 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.27□□□□□ -1.41
MRE11P49959 AC096996.1-201ENST00000563813 325 ntBASIC6.27□□□□□ -1.41
MRE11P49959 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.27□□□□□ -1.41
MRE11P49959 AC012254.3-201ENST00000591183 2117 ntBASIC6.27□□□□□ -1.41
MRE11P49959 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.27□□□□□ -1.41
MRE11P49959 AC121247.2-201ENST00000604776 136 ntBASIC6.27□□□□□ -1.41
MRE11P49959 AC073137.1-201ENST00000605636 634 ntBASIC6.27□□□□□ -1.41
MRE11P49959 AC024060.1-201ENST00000607052 494 ntBASIC6.27□□□□□ -1.41
MRE11P49959 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.27□□□□□ -1.41
MRE11P49959 AL360219.1-201ENST00000610230 366 ntBASIC6.27□□□□□ -1.41
MRE11P49959 AP000648.2-201ENST00000624182 404 ntBASIC6.27□□□□□ -1.41
MRE11P49959 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC6.27□□□□□ -1.41
MRE11P49959 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.27□□□□□ -1.41
MRE11P49959 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
MRE11P49959 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
MRE11P49959 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
MRE11P49959 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
MRE11P49959 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
MRE11P49959 MTND5P23-201ENST00000430812 1655 ntBASIC6.26□□□□□ -1.41
MRE11P49959 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MRE11P49959 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MRE11P49959 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
MRE11P49959 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
MRE11P49959 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
MRE11P49959 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
MRE11P49959 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.26□□□□□ -1.41
MRE11P49959 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
MRE11P49959 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MRE11P49959 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.26□□□□□ -1.41
MRE11P49959 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
MRE11P49959 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
MRE11P49959 RNA5SP46-201ENST00000362370 120 ntBASIC6.26□□□□□ -1.41
MRE11P49959 RN7SKP124-201ENST00000364730 341 ntBASIC6.26□□□□□ -1.41
MRE11P49959 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
MRE11P49959 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MRE11P49959 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.26□□□□□ -1.41
MRE11P49959 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MRE11P49959 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.26□□□□□ -1.41
MRE11P49959 SNORD116-4-201ENST00000384733 96 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AL391422.1-201ENST00000402155 436 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AL021331.1-201ENST00000402817 582 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AL138880.1-201ENST00000405824 642 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AL356131.1-201ENST00000405826 414 ntBASIC6.26□□□□□ -1.41
MRE11P49959 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.26□□□□□ -1.41
MRE11P49959 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MRE11P49959 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC6.26□□□□□ -1.41
MRE11P49959 AL445213.1-201ENST00000412589 747 ntBASIC6.26□□□□□ -1.41
MRE11P49959 RPL35AP3-201ENST00000414680 288 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.26□□□□□ -1.41
MRE11P49959 VN1R31P-201ENST00000417498 730 ntBASIC6.26□□□□□ -1.41
MRE11P49959 TRGV6-201ENST00000417928 299 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AC008173.1-201ENST00000418901 264 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.26□□□□□ -1.41
MRE11P49959 AL513175.2-201ENST00000422071 443 ntBASIC6.26□□□□□ -1.41
MRE11P49959 MTCO3P30-201ENST00000426425 670 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.26□□□□□ -1.41
MRE11P49959 FTLP19-201ENST00000433300 394 ntBASIC6.26□□□□□ -1.41
MRE11P49959 GTF2IP3-201ENST00000433887 494 ntBASIC6.26□□□□□ -1.41
MRE11P49959 UBE2D3P1-201ENST00000436669 444 ntBASIC6.26□□□□□ -1.41
MRE11P49959 LAMTOR3P2-201ENST00000504479 232 ntBASIC6.26□□□□□ -1.41
MRE11P49959 AC021087.2-201ENST00000504656 1203 ntBASIC6.26□□□□□ -1.41
MRE11P49959 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC6.26□□□□□ -1.41
MRE11P49959 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.26□□□□□ -1.41
MRE11P49959 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.26□□□□□ -1.41
MRE11P49959 HMGB3P16-201ENST00000508037 287 ntBASIC6.26□□□□□ -1.41
MRE11P49959 CR383658.1-201ENST00000514609 734 ntBASIC6.26□□□□□ -1.41
MRE11P49959 RNU6-1028P-201ENST00000517164 93 ntBASIC6.26□□□□□ -1.41
MRE11P49959 WBP1LP3-201ENST00000523033 208 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms