Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 CBX1P3-201ENST00000413296 527 ntBASIC4.56□□□□□ -1.68
HTTP42858 RPL23AP46-201ENST00000438548 490 ntBASIC4.56□□□□□ -1.68
HTTP42858 AP001486.1-201ENST00000463339 476 ntBASIC4.56□□□□□ -1.68
HTTP42858 RPS29P19-201ENST00000479709 171 ntBASIC4.56□□□□□ -1.68
HTTP42858 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.56□□□□□ -1.68
HTTP42858 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.56□□□□□ -1.68
HTTP42858 RNA5SP446-201ENST00000515955 82 ntBASIC4.56□□□□□ -1.68
HTTP42858 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.56□□□□□ -1.68
HTTP42858 MIR5187-201ENST00000583479 76 ntBASIC4.56□□□□□ -1.68
HTTP42858 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.56□□□□□ -1.68
HTTP42858 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.56□□□□□ -1.68
HTTP42858 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 AC083899.2-201ENST00000423285 1376 ntBASIC4.56□□□□□ -1.68
HTTP42858 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 AL139095.1-201ENST00000404326 391 ntBASIC4.56□□□□□ -1.68
HTTP42858 RN7SKP284-201ENST00000411002 343 ntBASIC4.56□□□□□ -1.68
HTTP42858 CYCSP53-201ENST00000455540 265 ntBASIC4.56□□□□□ -1.68
HTTP42858 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.56□□□□□ -1.68
HTTP42858 AP000648.2-201ENST00000624182 404 ntBASIC4.56□□□□□ -1.68
HTTP42858 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HTTP42858 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HTTP42858 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HTTP42858 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HTTP42858 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HTTP42858 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HTTP42858 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HTTP42858 RNU4-64P-201ENST00000410795 131 ntBASIC4.55□□□□□ -1.68
HTTP42858 UBDP1-202ENST00000457888 382 ntBASIC4.55□□□□□ -1.68
HTTP42858 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.55□□□□□ -1.68
HTTP42858 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.55□□□□□ -1.68
HTTP42858 MTND1P6-201ENST00000523621 946 ntBASIC4.55□□□□□ -1.68
HTTP42858 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HTTP42858 OR5B10P-201ENST00000532869 642 ntBASIC4.55□□□□□ -1.68
HTTP42858 RPL23AP97-201ENST00000568955 471 ntBASIC4.55□□□□□ -1.68
HTTP42858 MIR4672-201ENST00000583126 81 ntBASIC4.55□□□□□ -1.68
HTTP42858 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.55□□□□□ -1.68
HTTP42858 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.55□□□□□ -1.68
HTTP42858 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HTTP42858 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HTTP42858 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HTTP42858 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC4.55□□□□□ -1.68
HTTP42858 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HTTP42858 RPS4XP10-201ENST00000465034 731 ntBASIC4.55□□□□□ -1.68
HTTP42858 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.55□□□□□ -1.68
HTTP42858 AL136126.1-201ENST00000473603 402 ntBASIC4.55□□□□□ -1.68
HTTP42858 AC108145.1-201ENST00000503770 153 ntBASIC4.55□□□□□ -1.68
HTTP42858 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.55□□□□□ -1.68
HTTP42858 RNU1-30P-201ENST00000606575 163 ntBASIC4.55□□□□□ -1.68
HTTP42858 AC023632.6-201ENST00000624338 2177 ntBASIC4.55□□□□□ -1.68
HTTP42858 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HTTP42858 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HTTP42858 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HTTP42858 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC4.55□□□□□ -1.68
HTTP42858 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
HTTP42858 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HTTP42858 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.55□□□□□ -1.68
HTTP42858 AL590609.2-201ENST00000421430 368 ntBASIC4.55□□□□□ -1.68
HTTP42858 MYL12BP2-201ENST00000503948 512 ntBASIC4.55□□□□□ -1.68
HTTP42858 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.54□□□□□ -1.68
HTTP42858 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
HTTP42858 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
HTTP42858 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HTTP42858 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HTTP42858 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.54□□□□□ -1.68
HTTP42858 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HTTP42858 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.54□□□□□ -1.68
HTTP42858 OR6K3-202ENST00000368146 996 ntBASIC4.54□□□□□ -1.68
HTTP42858 RPL7P28-201ENST00000437739 740 ntBASIC4.54□□□□□ -1.68
HTTP42858 MTND6P5-201ENST00000448266 512 ntBASIC4.54□□□□□ -1.68
HTTP42858 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.54□□□□□ -1.68
HTTP42858 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.54□□□□□ -1.68
HTTP42858 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.54□□□□□ -1.68
HTTP42858 AC007458.1-201ENST00000542812 373 ntBASIC4.54□□□□□ -1.68
HTTP42858 AL645927.2-201ENST00000618350 349 ntBASIC4.54□□□□□ -1.68
HTTP42858 MAPK10-371ENST00000641952 5209 ntBASIC4.54□□□□□ -1.68
HTTP42858 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HTTP42858 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HTTP42858 AL672167.1-204ENST00000641875 3017 ntBASIC4.54□□□□□ -1.68
HTTP42858 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HTTP42858 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HTTP42858 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HTTP42858 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HTTP42858 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HTTP42858 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HTTP42858 AL391219.1-201ENST00000422570 483 ntBASIC4.54□□□□□ -1.68
HTTP42858 RN7SL429P-201ENST00000479090 223 ntBASIC4.54□□□□□ -1.68
HTTP42858 RN7SL489P-201ENST00000486185 223 ntBASIC4.54□□□□□ -1.68
HTTP42858 RN7SL327P-201ENST00000488659 223 ntBASIC4.54□□□□□ -1.68
HTTP42858 BNIP3P41-201ENST00000503774 571 ntBASIC4.54□□□□□ -1.68
HTTP42858 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.54□□□□□ -1.68
HTTP42858 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.54□□□□□ -1.68
HTTP42858 AC006349.1-201ENST00000555526 235 ntBASIC4.54□□□□□ -1.68
HTTP42858 CYCSP40-201ENST00000575927 294 ntBASIC4.54□□□□□ -1.68
HTTP42858 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms