Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.5□□□□□ -1.69
RORAP35398 AC073091.2-201ENST00000603205 907 ntBASIC4.5□□□□□ -1.69
RORAP35398 AC090948.2-201ENST00000607363 564 ntBASIC4.5□□□□□ -1.69
RORAP35398 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RORAP35398 LINC00901.1-201ENST00000617252 152 ntBASIC4.5□□□□□ -1.69
RORAP35398 AC105105.5-201ENST00000622635 1294 ntBASIC4.5□□□□□ -1.69
RORAP35398 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RORAP35398 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RORAP35398 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RORAP35398 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RORAP35398 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.49□□□□□ -1.69
RORAP35398 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.49□□□□□ -1.69
RORAP35398 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RORAP35398 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RORAP35398 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.49□□□□□ -1.69
RORAP35398 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RORAP35398 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RORAP35398 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
RORAP35398 A2MP1-204ENST00000566278 4130 ntBASIC4.49□□□□□ -1.69
RORAP35398 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RORAP35398 AC126755.2-208ENST00000327792 462 ntBASIC4.49□□□□□ -1.69
RORAP35398 AC138969.1-213ENST00000331436 462 ntBASIC4.49□□□□□ -1.69
RORAP35398 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RORAP35398 RAB28P1-201ENST00000411517 641 ntBASIC4.49□□□□□ -1.69
RORAP35398 OR51B3P-201ENST00000412287 913 ntBASIC4.49□□□□□ -1.69
RORAP35398 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.49□□□□□ -1.69
RORAP35398 CNOT7P1-201ENST00000429006 852 ntBASIC4.49□□□□□ -1.69
RORAP35398 AC097523.2-201ENST00000435551 652 ntBASIC4.49□□□□□ -1.69
RORAP35398 MORF4L1P4-201ENST00000450245 976 ntBASIC4.49□□□□□ -1.69
RORAP35398 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.49□□□□□ -1.69
RORAP35398 snoU13.1-201ENST00000459157 104 ntBASIC4.49□□□□□ -1.69
RORAP35398 OR52A4P-201ENST00000472867 958 ntBASIC4.49□□□□□ -1.69
RORAP35398 AK3P4-201ENST00000504283 583 ntBASIC4.49□□□□□ -1.69
RORAP35398 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RORAP35398 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.49□□□□□ -1.69
RORAP35398 AC108043.1-201ENST00000512696 574 ntBASIC4.49□□□□□ -1.69
RORAP35398 SNORA26.10-201ENST00000516427 141 ntBASIC4.49□□□□□ -1.69
RORAP35398 AC093249.4-201ENST00000564755 259 ntBASIC4.49□□□□□ -1.69
RORAP35398 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.49□□□□□ -1.69
RORAP35398 RN7SL176P-201ENST00000580352 264 ntBASIC4.49□□□□□ -1.69
RORAP35398 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.49□□□□□ -1.69
RORAP35398 MIR8069-1-201ENST00000616627 86 ntBASIC4.49□□□□□ -1.69
RORAP35398 AC009237.17-201ENST00000618111 748 ntBASIC4.49□□□□□ -1.69
RORAP35398 MIR8069-2-201ENST00000621412 86 ntBASIC4.49□□□□□ -1.69
RORAP35398 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.49□□□□□ -1.69
RORAP35398 AC079298.2-201ENST00000623885 459 ntBASIC4.49□□□□□ -1.69
RORAP35398 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.49□□□□□ -1.69
RORAP35398 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.49□□□□□ -1.69
RORAP35398 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.49□□□□□ -1.69
RORAP35398 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RORAP35398 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RORAP35398 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.49□□□□□ -1.69
RORAP35398 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.49□□□□□ -1.69
RORAP35398 AL592182.3-201ENST00000642132 3304 ntBASIC4.49□□□□□ -1.69
RORAP35398 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RORAP35398 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RORAP35398 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.48□□□□□ -1.69
RORAP35398 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RORAP35398 LINC01109-201ENST00000603837 3081 ntBASIC4.48□□□□□ -1.69
RORAP35398 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RORAP35398 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RORAP35398 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RORAP35398 KARSP3-201ENST00000571212 1504 ntBASIC4.48□□□□□ -1.69
RORAP35398 AC125257.1-201ENST00000560400 2930 ntBASIC4.48□□□□□ -1.69
RORAP35398 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.48□□□□□ -1.69
RORAP35398 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.48□□□□□ -1.69
RORAP35398 RNU1-82P-201ENST00000390851 165 ntBASIC4.48□□□□□ -1.69
RORAP35398 AL591848.1-201ENST00000413092 322 ntBASIC4.48□□□□□ -1.69
RORAP35398 TMBIM7P-201ENST00000418074 855 ntBASIC4.48□□□□□ -1.69
RORAP35398 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RORAP35398 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.48□□□□□ -1.69
RORAP35398 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.48□□□□□ -1.69
RORAP35398 RPL23AP4-201ENST00000427757 463 ntBASIC4.48□□□□□ -1.69
RORAP35398 RPL23AP1-201ENST00000428990 471 ntBASIC4.48□□□□□ -1.69
RORAP35398 AC016712.1-201ENST00000431088 378 ntBASIC4.48□□□□□ -1.69
RORAP35398 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RORAP35398 RPL23AP37-201ENST00000479658 549 ntBASIC4.48□□□□□ -1.69
RORAP35398 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.48□□□□□ -1.69
RORAP35398 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.48□□□□□ -1.69
RORAP35398 AC034205.1-201ENST00000520621 638 ntBASIC4.48□□□□□ -1.69
RORAP35398 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.48□□□□□ -1.69
RORAP35398 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.48□□□□□ -1.69
RORAP35398 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RORAP35398 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.48□□□□□ -1.69
RORAP35398 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.48□□□□□ -1.69
RORAP35398 MIR4715-201ENST00000584117 79 ntBASIC4.48□□□□□ -1.69
RORAP35398 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.48□□□□□ -1.69
RORAP35398 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.48□□□□□ -1.69
RORAP35398 AC020915.5-201ENST00000596836 964 ntBASIC4.48□□□□□ -1.69
RORAP35398 RPL26P30-202ENST00000602923 645 ntBASIC4.48□□□□□ -1.69
RORAP35398 AC123786.2-201ENST00000603459 275 ntBASIC4.48□□□□□ -1.69
RORAP35398 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.48□□□□□ -1.69
RORAP35398 AL023881.1-201ENST00000621088 301 ntBASIC4.48□□□□□ -1.69
RORAP35398 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.48□□□□□ -1.69
RORAP35398 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.48□□□□□ -1.69
RORAP35398 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RORAP35398 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RORAP35398 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RORAP35398 AC009313.2-201ENST00000417893 1941 ntBASIC4.48□□□□□ -1.69
RORAP35398 AC091046.3-201ENST00000631455 1574 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms