Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNA1P35221 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTNNA1P35221 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.08□□□□□ -1.6
CTNNA1P35221 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.07□□□□□ -1.6
CTNNA1P35221 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.07□□□□□ -1.6
CTNNA1P35221 ZNF90P1-201ENST00000480493 1951 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CTNNA1P35221 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.07□□□□□ -1.6
CTNNA1P35221 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.07□□□□□ -1.6
CTNNA1P35221 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNA1P35221 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNA1P35221 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNA1P35221 MTND4P31-201ENST00000425607 1343 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CTNNA1P35221 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CTNNA1P35221 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.07□□□□□ -1.6
CTNNA1P35221 IL6STP1-201ENST00000346911 1020 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNA1P35221 Z97832.1-201ENST00000402490 328 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 BMS1P13-201ENST00000417301 885 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.07□□□□□ -1.6
CTNNA1P35221 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.07□□□□□ -1.6
CTNNA1P35221 AL137845.2-201ENST00000444292 988 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 AL163193.1-201ENST00000444895 788 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 TDGF1P1-201ENST00000445734 527 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 AL606490.1-201ENST00000452266 765 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 MTND2P3-201ENST00000452458 470 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.07□□□□□ -1.6
CTNNA1P35221 RPS20P4-201ENST00000461659 355 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 CABYRP1-201ENST00000465493 1045 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 BX284632.1-201ENST00000478218 541 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 AC090114.3-201ENST00000479267 829 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 AC079841.1-201ENST00000481228 950 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 RN7SL101P-201ENST00000496350 279 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 AC023050.1-201ENST00000498198 304 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNA1P35221 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.07□□□□□ -1.6
CTNNA1P35221 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.07□□□□□ -1.6
CTNNA1P35221 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.07□□□□□ -1.6
CTNNA1P35221 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.07□□□□□ -1.6
CTNNA1P35221 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNA1P35221 CKS1BP1-201ENST00000555221 240 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.07□□□□□ -1.6
CTNNA1P35221 AL049839.1-201ENST00000556151 657 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 OR1F2P-201ENST00000570470 933 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 MTND4LP24-201ENST00000572277 291 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.07□□□□□ -1.6
CTNNA1P35221 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.07□□□□□ -1.6
CTNNA1P35221 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CTNNA1P35221 MEMO1P5-201ENST00000604810 406 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 uc_338.18-201ENST00000615451 175 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 AC000123.2-201ENST00000623124 461 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.07□□□□□ -1.6
CTNNA1P35221 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CTNNA1P35221 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CTNNA1P35221 AC092162.3-201ENST00000624511 1624 ntBASIC5.07□□□□□ -1.6
CTNNA1P35221 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
CTNNA1P35221 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNA1P35221 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNA1P35221 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTNNA1P35221 AC022893.2-201ENST00000564832 3296 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CTNNA1P35221 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTNNA1P35221 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CTNNA1P35221 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CTNNA1P35221 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTNNA1P35221 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.06□□□□□ -1.6
CTNNA1P35221 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTNNA1P35221 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CTNNA1P35221 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.06□□□□□ -1.6
CTNNA1P35221 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CTNNA1P35221 RNA5SP455-201ENST00000365190 119 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.06□□□□□ -1.6
CTNNA1P35221 AL021331.1-201ENST00000402817 582 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 ARL4AP5-201ENST00000404372 599 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 HMGB1P13-201ENST00000406019 642 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.06□□□□□ -1.6
CTNNA1P35221 RPL30P3-201ENST00000424262 333 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.06□□□□□ -1.6
CTNNA1P35221 AL451139.1-201ENST00000434718 346 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.06□□□□□ -1.6
CTNNA1P35221 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.06□□□□□ -1.6
CTNNA1P35221 CNOT7P2-201ENST00000441051 832 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 AL353093.1-201ENST00000441292 436 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 ARL4AP3-201ENST00000441452 574 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 RPS15AP29-201ENST00000445539 400 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.06□□□□□ -1.6
CTNNA1P35221 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.06□□□□□ -1.6
CTNNA1P35221 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.06□□□□□ -1.6
CTNNA1P35221 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CTNNA1P35221 DEFB109F-201ENST00000491870 277 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 RPS4XP18-201ENST00000495480 763 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 MRPS33P2-201ENST00000507850 322 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 AC021146.3-201ENST00000511911 260 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 HMGB1P19-201ENST00000517578 577 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 IGKV2-36-201ENST00000519999 223 ntBASIC5.06□□□□□ -1.6
CTNNA1P35221 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms